Query= MSMg01no179_h16.b1 MSMg01no179_h16.b1 CHROMAT_FILE:
MSMg01no179_h16.b1 PHD_FILE: MSMg01no179_h16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:52:30 2005
(233 letters)
>mm_chr11_80119273_80119901
Length = 629
Score = 416 bits (215), Expect = e-121
Identities = 227/233 (97%), Gaps = 4/233 (1%)
Strand = Plus / Plus
Query: 1 ttgaccatgcatcctctttaggtcaattaagcagacacaatacaaaagcagagaagggga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttgaccatgcatcctctttaggtcaattaagcagacacaatacaaaagcagagaagggga 260
Query: 61 tttattcaatgtggccaccgtgggaagagcagtaaagagatctagtgaccccccccccca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 261 tttattcaatgtggccaccgtgggaagagcagtaaagagatctagtgaccccccc----a 316
Query: 121 gagtccatcttctatgcagacatggcatttgggtttcagagttaacagcacaagaactac 180
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 gagtccatcttctgtgcagacatggcatttgggtttcagagttaacagcacaagaactac 376
Query: 181 tcacagctaagccatcgtgtttgagatgtgtgtggcccctgcttctgcaccat 233
||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 377 tcacagctaagccatcgtggttgagatgtgtgtggcccctgcttctgcaccat 429
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 233
Length of database: 629
Length adjustment: 9
Effective length of query: 224
Effective length of database: 620
Effective search space: 138880
Effective search space used: 138880
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no179_h16.g1 MSMg01no179_h16.g1 CHROMAT_FILE:
MSMg01no179_h16.g1 PHD_FILE: MSMg01no179_h16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:52:30 2005
(236 letters)
>mm_chr11_80288350_80288985
Length = 636
Score = 410 bits (212), Expect = e-119
Identities = 230/236 (97%)
Strand = Plus / Minus
Query: 1 tttacaattcaatcctagaggtcacgggccttctccagcacggccacgtgcgtgttctct 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 436 tttacaattcaatcctagaggtcacgggccttctccagcacggccacatgcgtgttctct 377
Query: 61 cttgtcttctgtctggccaaccctaccccattaccttcgaaaacctctgccaactacccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 cttgtcttctgtctggccaaccctaccccattaccttcgaaaacctctgccaactacccc 317
Query: 121 agtctcctcgtgtttgcagaacagaaaaaggatggcactaccgtactacatgctgagggg 180
|| ||||||||||||||||||||||| |||||||||||||| ||||||||||||||| |
Sbjct: 316 agcctcctcgtgtttgcagaacagaagcaggatggcactaccatactacatgctgaggtg 257
Query: 181 agaggttgtcaggaaccctactcacctaggccacgcctggtacgcttgcttcacgg 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 agaggttgtcaggaaccctactcacctaggccacgcctggtacgcttgcttcacgg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 236
Length of database: 636
Length adjustment: 9
Effective length of query: 227
Effective length of database: 627
Effective search space: 142329
Effective search space used: 142329
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
