Query= MSMg01no182_h15.b1 MSMg01no182_h15.b1 CHROMAT_FILE:
MSMg01no182_h15.b1 PHD_FILE: MSMg01no182_h15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:56:14 2005
(370 letters)
>mm_chr11_39242697_39243472
Length = 776
Score = 659 bits (341), Expect = 0.0
Identities = 363/373 (97%), Gaps = 7/373 (1%)
Strand = Plus / Plus
Query: 4 ggaattcaaatctatccaccattaaaactccaactgtcacacttataatggctatcttca 63
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcaaatctaaacaccattaaaactccaactgtcacacttataatggctatcttca 263
Query: 64 cataaataacaagggccaatgaggctgcattaaatagatacagatatac-g-----gtgt 117
||||||||||||||||||||||||||||||||||||||||||||||||| | ||||
Sbjct: 264 cataaataacaagggccaatgaggctgcattaaatagatacagatatacagatacagtgt 323
Query: 118 tggatggagggtaaactgaagtaggaaaaatggagatcaacataaaggatttaataaaga 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tggatggagggtaaactgaagtaggaaaaatggagatcaacataaaggatttaataaaga 383
Query: 178 gaaacaaagccaggcagtggtggtgcacacctttaatcccagcacttggtaggcagaggc 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gaaacaaagccaggcagtggtggtgcacacctttaatcccagcacttggtaggcagaggc 443
Query: 238 tggtggatttctgagtttgaagccagcctggtctacagagtgagttccaggacagccagg 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tggtggatttctgagtttgaagccagcctggtctacagagtgagttccaggacagccagg 503
Query: 298 gctacacagagaaaccctgacttgaacaaccaaataaataaataaatagaaataaaaact 357
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||
Sbjct: 504 gctacacagagaaaccctgacttgaaaaaccaaataaataaataaatagaaataaaa-ct 562
Query: 358 gaaggttaccata 370
|||||||||||||
Sbjct: 563 gaaggttaccata 575
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 370
Length of database: 776
Length adjustment: 9
Effective length of query: 361
Effective length of database: 767
Effective search space: 276887
Effective search space used: 276887
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no182_h15.g1 MSMg01no182_h15.g1 CHROMAT_FILE:
MSMg01no182_h15.g1 PHD_FILE: MSMg01no182_h15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:56:14 2005
(288 letters)
>mm_chr11_39356119_39356806
Length = 688
Score = 543 bits (281), Expect = e-159
Identities = 284/285 (99%)
Strand = Plus / Minus
Query: 4 aaaaaaaaaaaaaacaggaaagaaaaataacacagtaaaagcatatgaaatcatttaaga 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aaaaaaaaaaaaaacaggaaagaaaaataacacagtaaaagcatatgaaatcatttaaga 429
Query: 64 aaaagaagcccatattctcaaagacaatattatagtacttagaaaataaatatgaagaca 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 aaaagaagcccatattctcaaagacaatattatagtacttagaaaataaatatgaagaca 369
Query: 124 gaggtctgtgtacaaaataaaagatatcacacacaatcatctcatgaataaaactcaata 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 gaggtctgtgtacaaaataaaagatatcacacacaatcatctcatgaataaaactcaata 309
Query: 184 tatccttgtggcatgatgagaagatatttatctcccagtgttaacatacataacatcttc 243
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 308 tatccttgtggcatgatgagaagatatttatctctcagtgttaacatacataacatcttc 249
Query: 244 cacttgatatagtatttgcaagcttttatctaatagagtttgact 288
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 cacttgatatagtatttgcaagcttttatctaatagagtttgact 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 688
Length adjustment: 9
Effective length of query: 279
Effective length of database: 679
Effective search space: 189441
Effective search space used: 189441
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
