Query= MSMg01no182_o09.b1 MSMg01no182_o09.b1 CHROMAT_FILE:
MSMg01no182_o09.b1 PHD_FILE: MSMg01no182_o09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:56:46 2005
(292 letters)
>mm_chr11_107888424_107889114
Length = 691
Score = 549 bits (284), Expect = e-161
Identities = 290/292 (99%), Gaps = 1/292 (0%)
Strand = Plus / Plus
Query: 1 gttaaaaattccttcttaataaaagttaccaaagtaatttttaaaaagcatttttttaat 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 201 gttaaaaattccttcttaataaaagttaccaaagtaatttttaaaaagcatttttt-aat 259
Query: 61 gcccagcattctattttgtagcaaagactttaaaataagttcagtttgtacatttacatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 gcccagcattctattttgtagcaaagactttaaaataagttcagtttgtacatttacatg 319
Query: 121 gtttaaaaattcctcatctttgtatataacaactgattgtcttcatacataaatttctgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 gtttaaaaattcctcatctttgtatataacaactgattgtcttcatacataaatttctgc 379
Query: 181 ttttcttcctgggctgcattcttagaaggagagtaaaagatataaaaacccttgccaaac 240
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ttttcttcttgggctgcattcttagaaggagagtaaaagatataaaaacccttgccaaac 439
Query: 241 tgctccccccaaagttgtatcaaagtcctaccaaaaatcatattaaagataa 292
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tgctccccccaaagttgtatcaaagtcctaccaaaaatcatattaaagataa 491
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 292
Length of database: 691
Length adjustment: 9
Effective length of query: 283
Effective length of database: 682
Effective search space: 193006
Effective search space used: 193006
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no182_o09.g1 MSMg01no182_o09.g1 CHROMAT_FILE:
MSMg01no182_o09.g1 PHD_FILE: MSMg01no182_o09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:56:46 2005
(244 letters)
>mm_chr11_108046659_108047302
Length = 644
Score = 470 bits (243), Expect = e-137
Identities = 243/243 (100%)
Strand = Plus / Minus
Query: 1 attcaatgaaatagtgaattcttcactgcataaagaaaccactggtgtttatgtgctgct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 attcaatgaaatagtgaattcttcactgcataaagaaaccactggtgtttatgtgctgct 384
Query: 61 tgctaatgcctccaaagagctccactccaagggagtcagagaagtcagagagctcataaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 tgctaatgcctccaaagagctccactccaagggagtcagagaagtcagagagctcataaa 324
Query: 121 atccacagatactggacctaccctgccccaccatcttcaagaataaggggtcagaaaagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 atccacagatactggacctaccctgccccaccatcttcaagaataaggggtcagaaaagc 264
Query: 181 actggagaagaagccagctgtgcccagatggcagcagcctgtggaagtgtgttctgagtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 actggagaagaagccagctgtgcccagatggcagcagcctgtggaagtgtgttctgagtt 204
Query: 241 ctt 243
|||
Sbjct: 203 ctt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space: 149225
Effective search space used: 149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
