Query= MSMg01no183_g23.b1 MSMg01no183_g23.b1 CHROMAT_FILE:
MSMg01no183_g23.b1 PHD_FILE: MSMg01no183_g23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:57:27 2005
(320 letters)
>mm_chr11_109131376_109132094
Length = 719
Score = 594 bits (307), Expect = e-174
Identities = 313/315 (99%), Gaps = 1/315 (0%)
Strand = Plus / Plus
Query: 4 ggaattcatcgagttgctcatgtgacttttttttttcacaattccatttgtttaatcttc 63
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 204 ggaattcatcgagttgctcatgtgacttttttttt-cacaattccatttgtttaatcttc 262
Query: 64 tgctcattcatggatttattgatctcctactatgttccaattactgggagtcaaaacata 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 tgctcattcatggatttattgatctcctactatgttccaattactgggagtcaaaacata 322
Query: 124 gctccagcctttgagtggtttttagtctaagcattgcaagagtactcaagtaaatacaga 183
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 323 gctccagcctttgagtggtttttagtctaagcgttgcaagagtactcaagtaaatacaga 382
Query: 184 cttgcctgtggtgttcgtactgtgagaaaacattatgaaaacagaagcaaaatcaaaaac 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 cttgcctgtggtgttcgtactgtgagaaaacattatgaaaacagaagcaaaatcaaaaac 442
Query: 244 ggtctctgtagtgattcagaaatgtgtctccaggcccttcctgtggatggaggggtctgt 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 ggtctctgtagtgattcagaaatgtgtctccaggcccttcctgtggatggaggggtctgt 502
Query: 304 ttcccctcccgctta 318
|||||||||||||||
Sbjct: 503 ttcccctcccgctta 517
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 320
Length of database: 719
Length adjustment: 9
Effective length of query: 311
Effective length of database: 710
Effective search space: 220810
Effective search space used: 220810
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no183_g23.g1 MSMg01no183_g23.g1 CHROMAT_FILE:
MSMg01no183_g23.g1 PHD_FILE: MSMg01no183_g23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:57:27 2005
(292 letters)
>mm_chr11_109293766_109294457
Length = 692
Score = 513 bits (265), Expect = e-150
Identities = 284/293 (96%), Gaps = 6/293 (2%)
Strand = Plus / Minus
Query: 1 tagagaaactgcgagtttcacagagtttctcctcaaaaacaaaactttaaccc---cttc 57
||||||||||||||||||||||||||||||||||||||||||||| || | ||||
Sbjct: 490 tagagaaactgcgagtttcacagagtttctcctcaaaaacaaaac---aaaacaaacttc 434
Query: 58 actcagatagtccaagtcaagtactccaaaagagccaagataaaacagtcatggtttgcc 117
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 actcagatagtccaagtcaagtactccaaaagagccaagataaaacagtcatggtttgcc 374
Query: 118 atctggagcacaagggcagacctctgcctcacccattgcttgagtttctggcttttccta 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 atctggagcacaagggcagacctctgcctcacccattgcttgagtttctggcttttccta 314
Query: 178 cagcagagcccgctgtccctcttgctctctgtctgtagagagaagagcctcttccctccc 237
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 cagcagagcccactgtccctcttgctctctgtctgtagagagaagagcctcttccctccc 254
Query: 238 ctatttcctttctaaaagtgcaggaggtgggtaacaggtggccagaatcaaac 290
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 ctatttcctttctaaaagtgcaggaggtgggtaacaggtggccagaatcaaac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 292
Length of database: 692
Length adjustment: 9
Effective length of query: 283
Effective length of database: 683
Effective search space: 193289
Effective search space used: 193289
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
