Query= MSMg01no184_j16.b1 MSMg01no184_j16.b1 CHROMAT_FILE:
MSMg01no184_j16.b1 PHD_FILE: MSMg01no184_j16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:59:02 2005
(315 letters)
>mm_chr11_12253959_12254673
Length = 715
Score = 586 bits (303), Expect = e-172
Identities = 309/311 (99%), Gaps = 2/311 (0%)
Strand = Plus / Plus
Query: 5 gaattctttgatcttcctcaccacacagtggaggtcaagtatggagttgtgatagatcat 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctttgatcttcctcaccacacagtggaggtcaagtatggagttgtgatagatcat 264
Query: 65 acattcagcctatctctggatgcgtgtttccaatagtagtcattggcaacacccttctca 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 acattcagcctatctctggatgcgtgtttccaatagtagtcattggcaacacccttctca 324
Query: 125 cacatatttacgtcccaggtgcatgctcacacatgtacccatacatgtacaacatggcca 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 cacatatttacgtcccaggtgcatgctcacacatgtacccatacatgtacaacatggcca 384
Query: 185 aagttaaacatgtaagggagggcttccaaatcacaaaagaatatggctgaaaaactggaa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aagttaaacatgtaagggagggcttccaaatcacaaaagaatatggctgaaaaactggaa 444
Query: 245 -ttttcacttcttagccatttgtctccattccctttaaactgttctacacttgggctgga 303
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 atttt-acttcttagccatttgtctccattccctttaaactgttctacacttgggctgga 503
Query: 304 agtccagatgt 314
|||||||||||
Sbjct: 504 agtccagatgt 514
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 315
Length of database: 715
Length adjustment: 9
Effective length of query: 306
Effective length of database: 706
Effective search space: 216036
Effective search space used: 216036
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no184_j16.g1 MSMg01no184_j16.g1 CHROMAT_FILE:
MSMg01no184_j16.g1 PHD_FILE: MSMg01no184_j16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:59:02 2005
(218 letters)
>mm_chr11_12328802_12329419
Length = 618
Score = 406 bits (210), Expect = e-118
Identities = 216/218 (99%)
Strand = Plus / Minus
Query: 1 caagaccactgaagtgactgagtattttaggaattgtttttgattatcagacaatttagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 caagaccactgaagtgactgagtattttaggaattgtttttgattatcagacaatttagg 359
Query: 61 cacgttaactgtttccaaggaggtaaaattagtttgtctctctggcaaagcttgccattc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 cacgttaactgtttccaaggaggtaaaattagtttgtctctctggcaaagcttgccattc 299
Query: 121 tgatttagaatctcaatctttaaatgcctgctagacccagccactctaaatatgcagcag 180
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 298 tgatttagaatctcaatctttaaatgcctgctagacccagccactataaatatgcagcag 239
Query: 181 atgagctgcccagcccttctgataggaggagctgagcg 218
|||||||||||||||| |||||||||||||||||||||
Sbjct: 238 atgagctgcccagcccctctgataggaggagctgagcg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 218
Length of database: 618
Length adjustment: 9
Effective length of query: 209
Effective length of database: 609
Effective search space: 127281
Effective search space used: 127281
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|