Query= MSMg01no187_i10.b1 MSMg01no187_i10.b1 CHROMAT_FILE:
MSMg01no187_i10.b1 PHD_FILE: MSMg01no187_i10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:02:52 2005
(310 letters)
>mm_chr11_86034460_86035169
Length = 710
Score = 590 bits (305), Expect = e-173
Identities = 305/305 (100%)
Strand = Plus / Minus
Query: 5 gaattccacacatgtctctaattcctagttaattattttgaaatgcctttaactcaaaag 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 gaattccacacatgtctctaattcctagttaattattttgaaatgcctttaactcaaaag 380
Query: 65 gcagaatttaattgtctcaagacattaacatttgaatttcaaattgtcatgataaataac 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 gcagaatttaattgtctcaagacattaacatttgaatttcaaattgtcatgataaataac 320
Query: 125 gaaggtaaataagttgaggtgtcgacctttaatgctcaccatctgcatggagaaagaaga 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 gaaggtaaataagttgaggtgtcgacctttaatgctcaccatctgcatggagaaagaaga 260
Query: 185 gagctgcatgagtagtgtggtcttgtgcaggtgaatgctgagctaaaggaattgctttgt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 gagctgcatgagtagtgtggtcttgtgcaggtgaatgctgagctaaaggaattgctttgt 200
Query: 245 ttttatttgagatgggatctcacaatatagctctggctgtcctggaactcactgtttaga 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 ttttatttgagatgggatctcacaatatagctctggctgtcctggaactcactgtttaga 140
Query: 305 ccagg 309
|||||
Sbjct: 139 ccagg 135
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 310
Length of database: 710
Length adjustment: 9
Effective length of query: 301
Effective length of database: 701
Effective search space: 211001
Effective search space used: 211001
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no187_i10.g1 MSMg01no187_i10.g1 CHROMAT_FILE:
MSMg01no187_i10.g1 PHD_FILE: MSMg01no187_i10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:02:52 2005
(653 letters)
>mm_chr11_86023563_86024615
Length = 1053
Score = 1232 bits (637), Expect = 0.0
Identities = 649/653 (99%), Gaps = 1/653 (0%)
Strand = Plus / Plus
Query: 1 ctcagttgacaagtttcagttgtaacactgaaaatttatagtctttagtctagtaatggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctcagttgacaagtttcagttgtaacactgaaaatttatagtctttagtctagtaatggg 260
Query: 61 gtacaagttctaatttatcagttcaatagattattcaataaaatgatttttaaaaataag 120
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 261 gtacaagttctaatttatcagttcaatagattattcagtaaaatgatttttaaaaataag 320
Query: 121 ctgtttccaagaaaaaaatatgtcctgtgaaatttgttttataaaagcagactccaggat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctgtttccaagaaaaaaatatgtcctgtgaaatttgttttataaaagcagactccaggat 380
Query: 181 ctgaagagggtggaccagtggttaagagcacttgcttctcttgtacaggacccaggttac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctgaagagggtggaccagtggttaagagcacttgcttctcttgtacaggacccaggttac 440
Query: 241 attcctagcacccacatggggactcataaccatcggtaactacaatttctagggttcctt 300
|||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 441 attcctagcacccatatggg-actcataaccatcggtaactacaatttctagggttcctt 499
Query: 301 tcatttatgtgaccttaaagaaagggatatattaaagccccagaaccagggtgtcctaga 360
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 500 tcatttatgtgaccttaaagaaagggatatattaaagccccagaactagggtgtcctaga 559
Query: 361 ttctaactccctcctggtaattttacattaacagttgtgaaataaaacataaaagctaca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ttctaactccctcctggtaattttacattaacagttgtgaaataaaacataaaagctaca 619
Query: 421 gttcattgttaaagaatgaatgtttataaatcaatatccaaaatagttgcacacatctgt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 gttcattgttaaagaatgaatgtttataaatcaatatccaaaatagttgcacacatctgt 679
Query: 481 tttgacttgaataaaaaaaatcacattgtgacaaagcttataaccttaacttaagatata 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 tttgacttgaataaaaaaaatcacattgtgacaaagcttataaccttaacttaagatata 739
Query: 541 tgaatattaacatttactaatattatttacatattttatttacatcatcaacaaattgga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 tgaatattaacatttactaatattatttacatattttatttacatcatcaacaaattgga 799
Query: 601 tgaaaaacaggctatgttattactttaacacagtaggttatgactagtctttg 653
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 tgaaaaacaggctatgttattactttaacacagtaggttatgactagtctttg 852
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 653
Length of database: 1053
Length adjustment: 10
Effective length of query: 643
Effective length of database: 1043
Effective search space: 670649
Effective search space used: 670649
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
