Query= MSMg01no188_h08.b1 MSMg01no188_h08.b1 CHROMAT_FILE:
MSMg01no188_h08.b1 PHD_FILE: MSMg01no188_h08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:04:07 2005
(210 letters)
>mm_chr11_84544239_84544848
Length = 610
Score = 331 bits (171), Expect = 2e-95
Identities = 195/207 (94%), Gaps = 10/207 (4%)
Strand = Plus / Minus
Query: 5 gaattccttctaatcaggtctgggtaaacttattccactctctggggctcacattccttg 64
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 gaattctttctaatcaggtctgggtaaacttattccactctctggggctcacattccttg 286
Query: 65 ataagatacagaaccttctccatttcccatatctttgcatcaattcatggccacttttgg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 ataagatacagaaccttctccatttcccatatctttgcatcaattcatggccacttttgg 226
Query: 125 acactatactggaagatgaggacacacaca--gacacaca--gacactcacagacacaca 180
|||||||||||||||||||||||||||||| |||||||| ||||| |||||||||||
Sbjct: 225 acactatactggaagatgaggacacacacacagacacacacagacac--acagacacaca 168
Query: 181 cagacacacacagacacacacagacac 207
|| |||||||||||||||| ||||
Sbjct: 167 ca----cacacagacacacacacacac 145
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 210
Length of database: 610
Length adjustment: 9
Effective length of query: 201
Effective length of database: 601
Effective search space: 120801
Effective search space used: 120801
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no188_h08.g1 MSMg01no188_h08.g1 CHROMAT_FILE:
MSMg01no188_h08.g1 PHD_FILE: MSMg01no188_h08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:04:07 2005
(282 letters)
>mm_chr11_84443053_84443734
Length = 682
Score = 530 bits (274), Expect = e-155
Identities = 280/282 (99%)
Strand = Plus / Plus
Query: 1 ctgagagatgaaggtgagaaggggtcggggtgggggcctctcgtgcccctgataggaaaa 60
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 201 ctgagagatgaaggtgagaaggggtcggggtgggggcctctcgtgaccctgataggaaaa 260
Query: 61 gtgcagcagagtacaatgtgggaggcaggctcccctcaaggatgaggtaggtcaattctt 120
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 261 gtgcagcagagtacaatgtgggaggcaggctcccctcaaggatgaggaaggtcaattctt 320
Query: 121 ttgagtccttcctgtcagaagtgccaccacctcctggtgtgggacttccaagttctgctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttgagtccttcctgtcagaagtgccaccacctcctggtgtgggacttccaagttctgctt 380
Query: 181 tgtcatctgctgaagggactaaaaacacccattttctccagcttagaggtcttctccagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgtcatctgctgaagggactaaaaacacccattttctccagcttagaggtcttctccagt 440
Query: 241 ggtttgtgcctcttggtgaggctcaaagaataaagaactggg 282
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggtttgtgcctcttggtgaggctcaaagaataaagaactggg 482
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 282
Length of database: 682
Length adjustment: 9
Effective length of query: 273
Effective length of database: 673
Effective search space: 183729
Effective search space used: 183729
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
