Query= MSMg01no188_l07.b1 MSMg01no188_l07.b1 CHROMAT_FILE:
MSMg01no188_l07.b1 PHD_FILE: MSMg01no188_l07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:04:26 2005
(319 letters)
>mm_chr11_99364140_99364858
Length = 719
Score = 603 bits (312), Expect = e-177
Identities = 312/312 (100%)
Strand = Plus / Plus
Query: 5 gaattcaacgaaaagcactagctttcaggtttatattttataaacacagacatgtgacaa 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaacgaaaagcactagctttcaggtttatattttataaacacagacatgtgacaa 264
Query: 65 tccatccagatgcagatggcagttctggtgaccagccttctctgactctgctgcccgaat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tccatccagatgcagatggcagttctggtgaccagccttctctgactctgctgcccgaat 324
Query: 125 tccagcccctctctcctcagttcccacagctttgaattaaactgaactgacagccctcat 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tccagcccctctctcctcagttcccacagctttgaattaaactgaactgacagccctcat 384
Query: 185 gtgggaagtccacctaggtaatatatacagcattgtccataagaagtgcacatagtaatg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gtgggaagtccacctaggtaatatatacagcattgtccataagaagtgcacatagtaatg 444
Query: 245 ctattgaaacacatatatggctaggcatggtggtacacacctttaatcccagcacttggg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ctattgaaacacatatatggctaggcatggtggtacacacctttaatcccagcacttggg 504
Query: 305 agatagaagcag 316
||||||||||||
Sbjct: 505 agatagaagcag 516
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 719
Length adjustment: 9
Effective length of query: 310
Effective length of database: 710
Effective search space: 220100
Effective search space used: 220100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no188_l07.g1 MSMg01no188_l07.g1 CHROMAT_FILE:
MSMg01no188_l07.g1 PHD_FILE: MSMg01no188_l07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:04:26 2005
(448 letters)
>mm_chr11_99460484_99461330
Length = 847
Score = 820 bits (424), Expect = 0.0
Identities = 442/448 (98%), Gaps = 1/448 (0%)
Strand = Plus / Minus
Query: 1 agtgctcatttaacttctgcaaatttatctgatctcagatcacagtgttctcccaacaat 60
|||||||||||||||| ||||||||||||||||| |||||||| ||||||||| ||||||
Sbjct: 647 agtgctcatttaacttttgcaaatttatctgatcccagatcactgtgttctcctaacaat 588
Query: 61 tgacgctgagggaaaatgagaagtcacctctaccagcacacagatgttccaatctaggat 120
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 587 tgacactgagggaaaatgagaagtcacctctaccagcacacagatgttccaatctaggat 528
Query: 121 ttttgagaatggctctgtattgaattcattttttttaaatgaactccactgataccttgt 180
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 527 ttttgagaatggctctgtattgaattca-tttttttaaatgaactccactgataccttgt 469
Query: 181 gcaccccagcaaaatgaaacagataattctactctttctttatagcctttagtgttctgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 gcaccccagcaaaatgaaacagataattctactctttctttatagcctttagtgttctgt 409
Query: 241 gcagagtaaaccaaaacaagtttgtgatacttctaatgaaagcatattgctttctgcacc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 gcagagtaaaccaaaacaagtttgtgatacttctaatgaaagcatattgctttctgcacc 349
Query: 301 caaaatatgaagtggtcgaaaagatgacttattagtttttctttgcattattcagtggtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 caaaatatgaagtggtcgaaaagatgacttattagtttttctttgcattattcagtggtt 289
Query: 361 acatgtaaccattttcaacttcatgtctgtagtcatggctaccagacagcatccaccttt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 acatgtaaccattttcaacttcatgtctgtagtcatggctaccagacagcatccaccttt 229
Query: 421 actgagactggtatgcatgctattccag 448
||||||||||||||||||||||||||||
Sbjct: 228 actgagactggtatgcatgctattccag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 448
Length of database: 847
Length adjustment: 10
Effective length of query: 438
Effective length of database: 837
Effective search space: 366606
Effective search space used: 366606
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
