Query= MSMg01no188_o13.b1 MSMg01no188_o13.b1 CHROMAT_FILE:
MSMg01no188_o13.b1 PHD_FILE: MSMg01no188_o13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:04:43 2005
(312 letters)
>mm_chr11_92854918_92855627
Length = 710
Score = 545 bits (282), Expect = e-159
Identities = 301/308 (97%), Gaps = 2/308 (0%)
Strand = Plus / Plus
Query: 5 gaattcttcccttaagtagcttcttgtcagttgtttgttcataaatattttgacataatt 64
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 205 gaattcttcccttaagtagcttcttgtcagttgtttgttcataaatattttaacataatt 264
Query: 65 aatgtagctaatgtttatgttaaaatatttatagaatttcatgttttaacatgcatgctt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aatgtagctaatgtttatgttaaaatatttatagaatttcatgttttaacatgcatgctt 324
Query: 125 atgaacaagtcagtcatttctgaacatcagtgcaattccactttatgacaggcagtgtgc 184
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 atgaacaagtcggtcatttctgaacatcagtgcaattccactttatgacaggcagtgtgc 384
Query: 185 taagcactggcgaagctatacaatgtcttctcattccctgagctgttgttaagccacctt 244
|| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 taggcactggtgaagctatacaatgtcttctcattccctgagctgttgttaagccacctt 444
Query: 245 gaaataatactgtctgggttcatatctgaccactagagaaactctcagcatacgtggaca 304
||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||
Sbjct: 445 gaaataatactgtctgggttcatatctgaccactagaaaaactc--agcatacgtggaca 502
Query: 305 ctaaagca 312
||||||||
Sbjct: 503 ctaaagca 510
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 312
Length of database: 710
Length adjustment: 9
Effective length of query: 303
Effective length of database: 701
Effective search space: 212403
Effective search space used: 212403
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no188_o13.g1 MSMg01no188_o13.g1 CHROMAT_FILE:
MSMg01no188_o13.g1 PHD_FILE: MSMg01no188_o13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:04:43 2005
(591 letters)
>mm_chr11_92978567_92979557
Length = 991
Score = 1100 bits (569), Expect = 0.0
Identities = 584/589 (99%)
Strand = Plus / Minus
Query: 3 agtgcagtgcccacgctaatgtcctgcattttcatacgaattctgagaatcaaagtcagg 62
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 991 agtgcagtgcccacgctaatgtccggcattttcatacgaattctgagaatcaaagtcagg 932
Query: 63 tcctcttgcttgcaaagcaagcattttgctaattgagccactatcattcctgaactagct 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 931 tcctcttgcttgcaaagcaagcattttgctaattgagccactatcattcctgaactagct 872
Query: 123 ttttaaaatttttatttctttttgtttatttccattttacaaagtagaaagctgagggtt 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 871 ttttaaaatttttatttctttttgtttatttccattttacaaagtagaaagctgagggtt 812
Query: 183 cagaaggaggtcacttaccctgagcctaccacttcatcaaaactgcagcactcaggctca 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 811 cagaaggaggtcacttaccctgagcctaccacttcatcaaaactgcagcactcaggctca 752
Query: 243 gacttagcttctaattactcccagtgtaaactctgtggcttctgtgggcatttaaacaaa 302
|||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||
Sbjct: 751 gacttagcttctaattactccctgtgtaaactctgtggcttctgggggcatttaaacaaa 692
Query: 303 tgtgtgttctttaccagtcaaagtggatcatgagttagaattgcttcagtgggttaaagg 362
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 691 tgtgtgttctttaccagtcacagtggatcatgagttagaattgcttcagtgggttaaagg 632
Query: 363 atccagtgagataagtagagagctctttgctcagtgtctggtagcttttactatcacaac 422
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 631 atccagtgagataagtagagagctctttgctcagtgtctggtagcttttactatcacagc 572
Query: 423 aaagtggctgtttggagtgaattgagaaattatcaaatggaagaaggaaatcaacttcaa 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 aaagtggctgtttggagtgaattgagaaattatcaaatggaagaaggaaatcaacttcaa 512
Query: 483 gttttcacacctccatataaccctccctcagcagtctctagctctctgaaaggctcagga 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 gttttcacacctccatataaccctccctcagcagtctctagctctctgaaaggctcagga 452
Query: 543 aatgggcactacaacgctgtttatagtgacagagatcagaatcttgatt 591
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 aatgggcactacaacgctgtttatagtgacagagatcagaatcttgatt 403
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 591
Length of database: 991
Length adjustment: 10
Effective length of query: 581
Effective length of database: 981
Effective search space: 569961
Effective search space used: 569961
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
