Query= MSMg01no189_i02.b1 MSMg01no189_i02.b1 CHROMAT_FILE:
MSMg01no189_i02.b1 PHD_FILE: MSMg01no189_i02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:05:30 2005
(192 letters)
>mm_chr11_50333395_50333990
Length = 596
Score = 342 bits (177), Expect = 6e-99
Identities = 185/189 (97%), Gaps = 4/189 (2%)
Strand = Plus / Plus
Query: 5 gaattccatcagtacagaccacgccggtcaccctgcttcctggt---acctgggggtgca 61
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 205 gaattccatcagtacagaccacgccggtcaccctgcttcctggtggtacctgggggtgca 264
Query: 62 gtgagcacttactcatgcctaaactaaaaaaaa-ttaaagcaagaaaccaggccagtgac 120
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 265 gtgagcacttactcatgcctaaactaaaaaaaaattaaagcaagaaaccaggccagtgac 324
Query: 121 agtggatagagacacagtgtttttcaggaatgcccctgagtctgccccttggcactgcaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 agtggatagagacacagtgtttttcaggaatgcccctgagtctgccccttggcactgcaa 384
Query: 181 tgctctcac 189
|||||||||
Sbjct: 385 tgctctcac 393
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 192
Length of database: 596
Length adjustment: 8
Effective length of query: 184
Effective length of database: 588
Effective search space: 108192
Effective search space used: 108192
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no189_i02.g1 MSMg01no189_i02.g1 CHROMAT_FILE:
MSMg01no189_i02.g1 PHD_FILE: MSMg01no189_i02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:05:30 2005
(299 letters)
>mm_chr11_50369565_50370263
Length = 699
Score = 557 bits (288), Expect = e-163
Identities = 294/296 (99%)
Strand = Plus / Minus
Query: 1 agagaggtgtggcttcctgagatgctgataagttattgatgagggctcaaccctaataaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 agagaggtgtggcttcctgagatgctgataagttattgatgagggctcaaccctaataaa 563
Query: 61 acatctagaccacacctcaaaggctcaggaaacattgctgcaagggggtaggaagtatgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 acatctagaccacacctcaaaggctcaggaaacattgctgcaagggggtaggaagtatgt 503
Query: 121 aagagcagcacacagcctgaaagcctgcacaataaccagtgcagtcacggattctcagta 180
|||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||
Sbjct: 502 aagagcagcacacagcctgaaagcctgcacaataaccagtgcggtcatggattctcagta 443
Query: 181 ctcaaagttacctgcactgggccttcacaagactggccttgtcgacaatcaatgatggaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 ctcaaagttacctgcactgggccttcacaagactggccttgtcgacaatcaatgatggaa 383
Query: 241 gggagagggcatcacaggcatcctcctgctgagttattggctggtgatatttttta 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 gggagagggcatcacaggcatcctcctgctgagttattggctggtgatatttttta 327
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 299
Length of database: 699
Length adjustment: 9
Effective length of query: 290
Effective length of database: 690
Effective search space: 200100
Effective search space used: 200100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
