TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCTTCATCACATGTCCTTTCACTACTTGCTTTAGCAAGACATCTTTT
CTCCTGTGTCTGCTTCTGCCAAACTTCACTAAAGTGCTTCACTATTTTGC
CCTAGACTTTCACCCGTGTCCACGCTCCTTCAGATGTTTGCCCCAGCCAA
ACTCCATAGAACTACTGAATTTTCAAAGAATGCTTATGTTTCTATTTTAA
GCACTAAGTAATTTGAGGGTTTGTTCAGGTTGGTGCCAGCGCCACCTTTG
GCGTGAACTCAGCGGATGGCCCCATGGTCCCTAGAGGACTCTCCACACTG
CAGGTGCCCTAGTACACCCTGGATCTTAGGATCACTGAAGAGAGTCTGCA
CCAGAGAGGGCTCTGACCCCGGGACTCAGGTGAGAGTGCCATCTTGTATC
AAGGGTCTCTCAGAGACCAGTCTGCTCAAGAGAGCAAGCAGGCAGCAGAA
GCAACAGAGCTTCTTGGACAGGGTTCCTTCAGGCCCTCATCATCAGCCAG
GAGGCAGATCTGAGCCCCATTCCTCTGTGCACCTTCCCTGAAAGAGGAGA
GCTTACCTGCACTGGGATTCAGGAGAGAGTTAGACTCCAGGAATGCTGAC
AGAGGCTAACAAAATCACAGGAGTAACAAACTCCAGCCAGATACAGCTAT
AACAACTAACACCAA

CGATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXCTCCTGACTTACAGTGGAGTTTCAGA
GCCAAGTGTTGGGCCAGGTTTCTGGCTCAACTTTATATGCCAGATTGGAT
CACTTCCTTACACTTGCAAACACTTACTCTGAGTTATCCCTCTAGCCCCT
AAAATTTTAAAAACAGACTGCAACATTGCTAATTATTTGCCAACCAAGCG
AATTGTTTAAAATGATTTAACCAATTATTGGCTAACGAGAATTGCATTCT
ATTTTAGCCAACTGCTACTATGACTCAGCACTTCATACGGTAGATGTTAA
CTGCAAACGTTGATTGTAAAGAATACCCAACAGACACCACAATAAAGAAA
AATCTGAATTCCCTTTAATTTGCCATTGAAATGCAGAAAAAGTATTTTTT
AACTAAATTACCTTTGCTATTTCTTTCTGTAAATTGCACTAGAATAAAAT
TTTCCACTATAACTCACATATTACAACTGGGTGAAAAAAGTCTGTATATA
GATGGAATTGAGTGTATAATTTAGAATTGCTTTTTAAAGAATAATCATAG
TAATTAGTGTATTTTTTATCATCATATTGTTTATCTAAGTTTATATTTAA
ATAAGTCAAGACTTAATGTGAGGATTTTAAAGATCTCGAACAGGCTTCCT
ACTTGAGAAGAAAAG

Query= MSMg01no190_k02.g1 MSMg01no190_k02.g1 CHROMAT_FILE:
MSMg01no190_k02.g1 PHD_FILE: MSMg01no190_k02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:06:57 2005
         (634 letters)



>mm_chr11_27382278_27383311
          Length = 1034

 Score = 1122 bits (580), Expect = 0.0
 Identities = 616/628 (98%), Gaps = 2/628 (0%)
 Strand = Plus / Minus

                                                                       
Query: 8   cttacagtggagtttcagagccaagtgttgggccaggtttctggctcaactttatatgcc 67
           ||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||
Sbjct: 834 cttacagtggagtttcagagccaagtgttgggccaggtttctggctcaagttcatgtgcc 775

                                                                       
Query: 68  agattggatcacttccttacacttgcaaacacttactctgagttatccctctagccccta 127
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 774 agattggatcacttccttacacttgcaaacacttactctgagttatccctctagccccta 715

                                                                       
Query: 128 aaattttaaaaacagactgcaacattgctaattatttgccaaccaagcgaattgtttaaa 187
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 714 aaattttaaaaacaggctgcaacattgctaattatttgccaaccaagcgaattgtttaaa 655

                                                                       
Query: 188 atgatttaaccaattattggctaacgagaattgcattctattttagccaactgctactat 247
           ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||
Sbjct: 654 atgatttaaccaattattggctaactagaattgcattctattttagccacctgctactat 595

                                                                       
Query: 248 gactcagcacttcatacggtagatgttaactgcaaacgttgattgtaaagaatacccaac 307
           | ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 594 gtctcagcacttcatacagtagatgttaactgcaaacgttgattgtaaagaatacccaac 535

                                                                       
Query: 308 agacaccacaataaagaaaaatctgaattccctttaatttgccattgaaatgcagaaaaa 367
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 534 agacaccacaataaagaaaaatctgaattccctttaatttgccattgaaatgcagaaaat 475

                                                                       
Query: 368 gtatttttt-aactaaattacctttgctatttctttctgtaaattgcactagaataaaat 426
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 gtatttttttaactaaattacctttgctatttctttctgtaaattgcactagaataaaat 415

                                                                       
Query: 427 tttccactataactcacatattacaactgggtgaaaaaagtctgtatatagatggaattg 486
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 tttccactataactcacatattacaactgggtgaaaaaagtctgtatatagatggaattg 355

                                                                       
Query: 487 agtgtataatttagaattgctttttaaagaataatcatagtaattagtgtattttttatc 546
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 354 agtgtataatttagaattgctttttaaagaataatcatagtaattagtgtattttt-atc 296

                                                                       
Query: 547 atcatattgtttatctaagtttatatttaaataagtcaagacttaatgtgaggattttaa 606
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 atcatattgtttatttaagtttatatttaaataagtcaagacttaatgtgaggattttaa 236

                                       
Query: 607 agatctcgaacaggcttcctacttgaga 634
           ||||||||||||||||||||||||||||
Sbjct: 235 agatctcgaacaggcttcctacttgaga 208


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 634
Length of database: 1034
Length adjustment: 10
Effective length of query: 624
Effective length of database: 1024
Effective search space:   638976
Effective search space used:   638976
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)