Query= MSMg01no191_e16.b1 MSMg01no191_e16.b1 CHROMAT_FILE:
MSMg01no191_e16.b1 PHD_FILE: MSMg01no191_e16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:07:50 2005
(308 letters)
>mm_chr11_28311916_28312624
Length = 709
Score = 545 bits (282), Expect = e-159
Identities = 300/306 (98%), Gaps = 1/306 (0%)
Strand = Plus / Plus
Query: 4 ggaattctctctgttcc-tacactcaacaccagaattctttgcattcctgttcctttgtc 62
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctctctgttccatacactcaacaccagaattctttgcattcctgttcctttgtc 263
Query: 63 atgtcttactgcttcattaatgctctatctctttagtttcatgctttctcgactccccat 122
||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||
Sbjct: 264 atgtcttactgcttcattaatgctctagctctttagtttcatgctttctagactccccat 323
Query: 123 ttccatgctatcctcactttctttgctagggtcacttccatgtcacttctaatttagaaa 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ttccatgctatcctcactttctttgctagggtcacttccatgtcacttctaatttagaaa 383
Query: 183 gaggctttttctgactaatgtgtccccatcactctccaattctaaatgctgcttttgttt 242
||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||
Sbjct: 384 gaggctttttctgactaatgtgtccccatcactctccaattctaaatactgcttttattt 443
Query: 243 gcttcagcaaatattgcatatttaaggtcttaaaaagaacccacctgtttaactgtaaac 302
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 gcttcagaaaatattgcatatttaaggtcttaaaaagaacccacctgtttaactgtaaac 503
Query: 303 tgcatg 308
||||||
Sbjct: 504 tgcatg 509
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 308
Length of database: 709
Length adjustment: 9
Effective length of query: 299
Effective length of database: 700
Effective search space: 209300
Effective search space used: 209300
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no191_e16.g1 MSMg01no191_e16.g1 CHROMAT_FILE:
MSMg01no191_e16.g1 PHD_FILE: MSMg01no191_e16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:07:51 2005
(283 letters)
>mm_chr11_28420470_28421153
Length = 684
Score = 530 bits (274), Expect = e-155
Identities = 280/282 (99%), Gaps = 1/282 (0%)
Strand = Plus / Minus
Query: 1 acttacaaatataagcagtggaaatatttctgatctctgttctgtaactggcacaaaaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 acttacaaatataagcagtggaaatatttctgatctctgttctgtaactggcacaaaaac 423
Query: 61 tgcagtttttaaaccaagcccaagtccatgaaaaatatttatagaagtcaaaattgagag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 tgcagtttttaaaccaagcccaagtccatgaaaaatatttatagaagtcaaaattgagag 363
Query: 121 tgaattacatcattgagaaagttcagcattgctgtgtcaaggagatgataaagacctgat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 tgaattacatcattgagaaagttcagcattgctgtgtcaaggagatgataaagacctgat 303
Query: 181 aacggggaaaaaaa-ggagtaaggataagccccttccccctttatccatcaacatttata 239
|||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 aacgggaaaaaaaaaggagtaaggataagccccttccccctttatccatcaacatttata 243
Query: 240 ggatagcctgttgatcttgggaagaaagcagataggaaggag 281
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 ggatagcctgttgatcttgggaagaaagcagataggaaggag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 283
Length of database: 684
Length adjustment: 9
Effective length of query: 274
Effective length of database: 675
Effective search space: 184950
Effective search space used: 184950
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
