Query= MSMg01no191_m16.b1 MSMg01no191_m16.b1 CHROMAT_FILE:
MSMg01no191_m16.b1 PHD_FILE: MSMg01no191_m16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:08:32 2005
(200 letters)
>mm_chr11_54363253_54363852
Length = 600
Score = 379 bits (196), Expect = e-110
Identities = 196/196 (100%)
Strand = Plus / Plus
Query: 5 gaattcttttctcctctttctagtcctaaataaaacttcagtgtttgacttcctggaatg 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcttttctcctctttctagtcctaaataaaacttcagtgtttgacttcctggaatg 264
Query: 65 tgtgtgtgttttaatttttcagttctaggttttaatacatttttcataaatttcagtgct 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tgtgtgtgttttaatttttcagttctaggttttaatacatttttcataaatttcagtgct 324
Query: 125 taagtaagttctatgttgtcttttttggttggttagctttgagcttactaaatataatgg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 taagtaagttctatgttgtcttttttggttggttagctttgagcttactaaatataatgg 384
Query: 185 atggggttggtgtttg 200
||||||||||||||||
Sbjct: 385 atggggttggtgtttg 400
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 200
Length of database: 600
Length adjustment: 8
Effective length of query: 192
Effective length of database: 592
Effective search space: 113664
Effective search space used: 113664
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no191_m16.g1 MSMg01no191_m16.g1 CHROMAT_FILE:
MSMg01no191_m16.g1 PHD_FILE: MSMg01no191_m16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:08:32 2005
(283 letters)
>mm_chr11_54458083_54458765
Length = 683
Score = 447 bits (231), Expect = e-130
Identities = 264/283 (93%), Gaps = 13/283 (4%)
Strand = Plus / Minus
Query: 1 aatgccagctgcaactacttaggaagaccctgtttcaaaaaaaaaaaaaaaaaaaaaaaa 60
|||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 537 aatgccagctgcaactacttaggaagaccctgtttc-------------aaaaaaaaaaa 491
Query: 61 aaaaaaagccaagaactagtgatctggttcaatggcaaattacttgccttacatggggaa 120
|||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||
Sbjct: 490 aaaaaaagccaagaactagtaatctggttcaatggcagattacttgccttacatggggaa 431
Query: 121 aaccccccaaaaactgcaagaaaaacttatccaaattcatttaaaatggggtcaaaataa 180
||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 430 gaccccccaagaactgcaagaaaaacttatccaaattcatttaaaatggtgtcaaaataa 371
Query: 181 tacattctcaaaaatactgagcagctagtttaacagataaaaatgaaaaactaattctca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 tacattctcaaaaatactgagcagctagtttaacagataaaaatgaaaaactaattctca 311
Query: 241 caaactggcctcaaaaatctgtaggaatcttatcttttaggct 283
||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 310 caaactggcctcagaaatctgtaggaatcttatcttttaggct 268
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 283
Length of database: 683
Length adjustment: 9
Effective length of query: 274
Effective length of database: 674
Effective search space: 184676
Effective search space used: 184676
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
