Query= MSMg01no193_a07.b1 MSMg01no193_a07.b1 CHROMAT_FILE:
MSMg01no193_a07.b1 PHD_FILE: MSMg01no193_a07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:11:12 2005
(423 letters)
>mm_chr11_45047659_45048480
Length = 822
Score = 737 bits (381), Expect = 0.0
Identities = 399/405 (98%), Gaps = 1/405 (0%)
Strand = Plus / Minus
Query: 16 gaattcatgaagttgggaggaaaaggtactagtgaggaaaggagaggaattgagagacaa 75
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 gaattcatgaagttgggaggaaaaggtactagtgaggaaaggagaggaattgagagacaa 560
Query: 76 ttgagaggcaaggggtagccttaggtcacagggctttagatgtgcacatgaattctcaaa 135
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 ttgagaggcaaggggtag-tttaggtcacagggctttagatgtgcacatgaattctcaaa 501
Query: 136 tactaaaaaagagatggaaagagagtctggggttgtagaaaattctcagcatgggagaag 195
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tactaaaaaagagatggaaagagagtctggggttgtagaaaattctcagcatgggagaag 441
Query: 196 gctcagaagcagagacaaagaagcatattcgaggaactggagaaaggcgatctggctggt 255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 gctcagaagcagagacaaagaagcatattcgaggaactggagaaaggcgatctggctggt 381
Query: 256 gtacagggaggttggagaagacgaggaagcgggtacaggcagcatttacaccgagagtgc 315
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 380 gtacagggaggttggagaagacaaggaagcgggtacaggcagcatttacaccgagagtgc 321
Query: 316 atggtgtaaggagacctagaaatggtccccaagtgtatcacatattagaggatcttttgc 375
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 320 atggtgtaaggagacctagaaatggtccccaagtgtatcacatattagaggatcagctgc 261
Query: 376 ctctcccaagtcagttcagttcattaagctctcaggaaaatattt 420
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 ctctcccaagtcagttcagttcattaagctctcaggaaaatattt 216
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 423
Length of database: 822
Length adjustment: 9
Effective length of query: 414
Effective length of database: 813
Effective search space: 336582
Effective search space used: 336582
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no193_a07.g1 MSMg01no193_a07.g1 CHROMAT_FILE:
MSMg01no193_a07.g1 PHD_FILE: MSMg01no193_a07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:11:12 2005
(384 letters)
>mm_chr11_44898253_44899036
Length = 784
Score = 663 bits (343), Expect = 0.0
Identities = 366/377 (97%), Gaps = 6/377 (1%)
Strand = Plus / Plus
Query: 1 cctaagagaaatgaaacacatgcagactccaagcacagcatttattatcctgacactgcg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cctaagagaaatgaaacacatgcagactccaagcacagcatttattatcctgacactgcg 260
Query: 61 atttagtccacaaaaggcacaagaagtgtcactctggtctacctttgatagtcacacaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atttagtccacaaaaggcacaagaagtgtcactctggtctacctttgatagtcacacaca 320
Query: 121 cacacacacacacacacacacacacacacacacacacacacacacacacagtgtattctt 180
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 321 cacacacacacacacacacacacacacacacacacacacacaca------gtgtattctt 374
Query: 181 ccaaaacgcaattaacctgaaagctaattcttaaacacaaactaatatctcatatctgaa 240
|||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 ccaaaatgcaaataacctgaaagctaattcttaaacacaaactaatatctcatatctgaa 434
Query: 241 tggacctaatagatgccagatgacataatattaccctatccatttagatgaagtctcaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 tggacctaatagatgccagatgacataatattaccctatccatttagatgaagtctcaaa 494
Query: 301 gctttatttttttctacagctgagtatgtaatatcagttgcattttatatgactcacact 360
||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 495 gctttatttttttctacagctgagtatgtaagatcagatgcattttatatgactcacact 554
Query: 361 ctttttagccagctcat 377
|| ||||||||||||||
Sbjct: 555 ctctttagccagctcat 571
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 65
Number of extensions: 28
Number of successful extensions: 28
Number of sequences better than 10.0: 1
Number of HSP's gapped: 21
Number of HSP's successfully gapped: 1
Length of query: 384
Length of database: 784
Length adjustment: 9
Effective length of query: 375
Effective length of database: 775
Effective search space: 290625
Effective search space used: 290625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
