CAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCTGCATCTTGCTTTGAAGGCAGACATAAGGAGACTAGAATTCCACA
GTGGGCAAAGCTTAAGTAGAGACCTCCCAGCCTACCCCATAATAACACAC
TTCCGCTAACAAAGCCACATCTATTCCAACAAGGCCACACCTCCTAATAG
TGCCACTCCCCATGGACCAAGCAAAGGAAATGAGTTTTGTGATTGAGACT
TATTTTTCACAGACCTGCAGTGAAGAATCTATATCTATATCTATACTCTA
CATCTATATTTATACACACATACTGAAGCTTCTTCAAGAAGCACTATCAA
AAAGAACTTATTCTAATTTTATACTTGAAAAATACTTTTCTTCAAACGTT
GAAGCTGTAATATTCAAATATGTTACTACATGCTTCTCTCTGTTCTCAAC
CTTCCACACAGACTGTATAGACTCCAGGAAAAGTTTTCAATAAACACCGG
AAACTCAAGAATTAATAATAGCATTCATTGATTCTCTGTCATGATCCAGG
TTTGTACTAAATGCATTTGAGGGCATATTCGCTCCTTTAATTCTGCTTTA
TTTAAGCAAAATTAAAGGAGCTAGACAACTTCCTACATCTTCACAGTTAC
TAAGTGACATAAATGTAAGACTTGAATCCAAATTTATCTCAAACATATAA
TCTCTTAGGCCATATCATGGTTTTCAGAATATGAGGAAACCT

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACTGAATGGCA
GAGAAACACCTGAAAAAATGTTCAACATCCTTAATCATCAGGGAAATGCA
AATCAAAATAACCCTGAGATTCCATCTTACACAAGTCAGAATGGCAAAGT
TCAAAAATTCAGGTGACAGCAGATGATGTGGAGAAAGAGGAACACTCCTC
CATTGTTGGTGGGATTGCAAGCTTGTACAACCACTCTGGAAATCAGTCTG
GCGGTTCCTCAGAATATTGGACATAGTACTACCAGAGGATCCCGCAATAC
CTCTCCTGGGCATATATCCAGAAGATATTCCATCTAGTAAGAAAGACATA
TGCTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGCTGGAA
AGAACCCAGATGCCCCTCAACAGAGGAATGGATACAAAAAAATGTGGTAC
ATTTACACAATGGAATACTACTCAATTATTAAAAAGAATGAATTCTTGAA
ATTCCTAGGCAAATGTTTGGACCTGGAGGGCATCATCCTGAGTGAGGTAA
CCCAATCACAAAAGAACTCAAATGATATGTACTCACTGATAAGTGGATAT
TAGCCCAGAAACTTAGAATACCCAAGATACAAGATACAATTTACGAAACA
CATGATACTCAAGAAGAACGAAGACCAAAGTGTGGACACTTTGCN

Query= MSMg01no194_a22.b1 MSMg01no194_a22.b1 CHROMAT_FILE:
MSMg01no194_a22.b1 PHD_FILE: MSMg01no194_a22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:12:50 2005
         (693 letters)



>mm_chr11_42620550_42621642
          Length = 1093

 Score = 1280 bits (662), Expect = 0.0
 Identities = 683/692 (98%), Gaps = 6/692 (0%)
 Strand = Plus / Minus

                                                                        
Query: 5    gaattctgcatcttgctttgaaggcagacataaggagactagaattccacagtgggcaaa 64
            ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 gaattctgcatcttgatttgaaggcagacataaggagactagaattccacagtgggcaaa 1022

                                                                        
Query: 65   gcttaagtagagacctcccagcctaccccataataacacacttccgctaacaaagccaca 124
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 gcttaagtagagacctcccagcctaccccataataacacacttccgctaacaaagccaca 962

                                                                        
Query: 125  tctattccaacaaggccacacctcctaatagtgccactccccatggaccaagcaaaggaa 184
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961  tctattccaacaaggccacacctcctaatagtgccactccccatggaccaagcaaaggaa 902

                                                                        
Query: 185  atgagttttgtgattgagacttatttttcacagacctgcagtgaagaatctatatctata 244
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901  atgagttttgtgattgagacttatttttcacagacctgcagtgaagaatctatatctata 842

                                                                        
Query: 245  tctatactctacatctatatttatacacacatactgaag---cttcttcaagaagcacta 301
            ||||||||||||||||||||||||||||||||||| |||   |  |||| ||||||||||
Sbjct: 841  tctatactctacatctatatttatacacacatact-aagatac--cttcgagaagcacta 785

                                                                        
Query: 302  tcaaaaagaacttattctaattttatacttgaaaaatacttttcttcaaacgttgaagct 361
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 784  tcaaaaagaacttattctaattttatacttgaaaaatacttttcttcaaacgttgaagct 725

                                                                        
Query: 362  gtaatattcaaatatgttactacatgcttctctctgttctcaaccttccacacagactgt 421
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 724  gtaatattcaaatatgttactacatgcttctctctgttctcaaccttccacacagactgt 665

                                                                        
Query: 422  atagactccaggaaaagttttcaataaacaccggaaactcaagaattaataatagcattc 481
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664  atagactccaggaaaagttttcaataaacaccggaaactcaagaattaataatagcattc 605

                                                                        
Query: 482  attgattctctgtcatgatccaggtttgtactaaatgcatttgagggcatattcgctcct 541
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604  attgattctctgtcatgatccaggtttgtactaaatgcatttgagggcatattcgctcct 545

                                                                        
Query: 542  ttaattctgctttatttaagcaaaattaaaggagctagacaacttcctacatcttcacag 601
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544  ttaattctgctttatttaagcaaaattaaaggagctagacaacttcctacatcttcacag 485

                                                                        
Query: 602  ttactaagtgacataaatgtaagacttgaatccaaatttatctcaaacatataatctctt 661
            | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484  tgactaagtgacataaatgtaagacttgaatccaaatttatctcaaacatataatctctt 425

                                            
Query: 662  aggccatatcatggttttcagaatatgaggaa 693
            ||||||||||||||||||||||||||||||||
Sbjct: 424  aggccatatcatggttttcagaatatgaggaa 393


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 693
Length of database: 1093
Length adjustment: 10
Effective length of query: 683
Effective length of database: 1083
Effective search space:   739689
Effective search space used:   739689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)