Query= MSMg01no194_d21.b1 MSMg01no194_d21.b1 CHROMAT_FILE:
MSMg01no194_d21.b1 PHD_FILE: MSMg01no194_d21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:13:04 2005
(693 letters)
>mm_chr11_118236175_118237266
Length = 1092
Score = 1251 bits (647), Expect = 0.0
Identities = 680/691 (98%), Gaps = 5/691 (0%)
Strand = Plus / Plus
Query: 5 gaattcctgagaattgcctcctgtaggtggcagcaagggctgcctcactgcaggcttagt 64
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcctgagaattgcatcctgtaggtggcagcaagggctgcctcactgcaggcttagt 264
Query: 65 attgcccctctacacacaccaagaaagaagtgggaattgatgtaagtacagctgaggatg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 attgcccctctacacacaccaagaaagaagtgggaattgatgtaagtacagctgaggatg 324
Query: 125 gtgggtcaggccagcttagttaccattggcacccctccccaagtctgttgccatggcaac 184
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 325 gtgggtcaggccagcttagttaccattggcacccctccccaactctgttgccatggcaac 384
Query: 185 accgctcctgtggtattcactctcagaggcatagagcttcctgtgatgatgcccatctgc 244
|| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 385 actgctcctgtggtattcactctcagaggcatagagcttcctgtaatgatgcccatctgc 444
Query: 245 cttcaggggcttcttgctgaggggggagtggctgctctaacaggga-cacagcacattcc 303
|||||||||||||||||||||| ||||||||||||||||||||||| | |||||||||||
Sbjct: 445 cttcaggggcttcttgctgaggagggagtggctgctctaacagggatc-cagcacattcc 503
Query: 304 tggcccacaggggaccaaggaactagctacaccatgctggttctggctcctcccagtttc 363
||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 504 tggcctacaggggaccaaggaactagctacaccatgctggttctggctc-tcccagtttc 562
Query: 364 caggtaccatcctggctagttggtgctttctcttcatggagcggtctccacaggagatac 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 caggtaccatcctggctagttggtgctttctcttcatggagcggtctccacaggagatac 622
Query: 424 catctcacctgggatgtgttttgtctagctcaccctagtgtcaagaccaaggagtctcca 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 catctcacctgggatgtgttttgtctagctcaccctagtgtcaagaccaaggagtctcca 682
Query: 484 ggatagagccaactcatttagaacgggagctgactcaaagacaacctagagttgttttct 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 ggatagagccaactcatttagaacgggagctgactcaaagacaacctagagttgttttct 742
Query: 544 gagctcccagacaacttagcaccaggccacacagtcagtctccaacattgactctggaaa 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 gagctcccagacaacttagcaccaggccacacagtcagtctccaacattgactctggaaa 802
Query: 604 tcctcctgtcagccctgcctcccactcctcccaggggagttccgcatcaccatccaaact 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 803 tcctcctgtcagccctgcctcccactcctcccaggggagttccgcatcaccatccaaact 862
Query: 664 cacatcgc-anacttagagcctggctgatgg 693
|||||||| | ||||||||||||||||||||
Sbjct: 863 cacatcgcca-acttagagcctggctgatgg 892
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 693
Length of database: 1092
Length adjustment: 10
Effective length of query: 683
Effective length of database: 1082
Effective search space: 739006
Effective search space used: 739006
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no194_d21.g1 MSMg01no194_d21.g1 CHROMAT_FILE:
MSMg01no194_d21.g1 PHD_FILE: MSMg01no194_d21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:13:04 2005
(246 letters)
>mm_chr11_118272899_118273544
Length = 646
Score = 458 bits (237), Expect = e-133
Identities = 243/245 (99%)
Strand = Plus / Minus
Query: 1 tcctccagtgctctggacctgtagctgtgccatagtgtagagcccaccttgggcctggag 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 445 tcctccagtgctctggacctgtagctgtgccatagtgtagagcccagcttgggcctggag 386
Query: 61 ccaaaaccatgcaccaagttcgtaaagtgagcaacatgcaagactcagttcctgtacctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ccaaaaccatgcaccaagttcgtaaagtgagcaacatgcaagactcagttcctgtacctg 326
Query: 121 cttgtgttaatagaaaagtgccacggactgcatcaaaaccagcagcagtgtattcgcccg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 cttgtgttaatagaaaagtgccacggactgcatcaaaaccagcagcagtgtattcgcccg 266
Query: 181 cactaccttgtgtttgctttgtattgaaacagtgcagagcctgcccaggaagtaaagact 240
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 cactaccttgagtttgctttgtattgaaacagtgcagagcctgcccaggaagtaaagact 206
Query: 241 cagtg 245
|||||
Sbjct: 205 cagtg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 246
Length of database: 646
Length adjustment: 9
Effective length of query: 237
Effective length of database: 637
Effective search space: 150969
Effective search space used: 150969
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
