Query= MSMg01no195_n08.b1 MSMg01no195_n08.b1 CHROMAT_FILE:
MSMg01no195_n08.b1 PHD_FILE: MSMg01no195_n08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:15:10 2005
(461 letters)
>mm_chr11_108137081_108137941
Length = 861
Score = 789 bits (408), Expect = 0.0
Identities = 444/456 (97%)
Strand = Plus / Plus
Query: 6 gaattcagagcgtttccttcttttgtggagtctctgtgtacatagaatcattgactctca 65
|||||||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 gaattcagagcgaatcgttcttttgtggagtctctgtgtacatagaatcattgactctca 265
Query: 66 cctctaacttcccagaaccatcaaaatgtcactgggagtagagaacaaagcactctggct 125
||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||
Sbjct: 266 cctctaacttcccagaaccatcaaaatgtcactgggagtggagaccaaagcactctggct 325
Query: 126 gacaaccactaggtttaagctatcatttttttctctagtctgtaatatgtttttctgttt 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 gacaaccactaggtttaagctatcatttttttctctagtctgtaatatgtttttctgttt 385
Query: 186 tattgtatattaaagcaattcatcttgaaagaacagaaataaatggcaatcactgaggcc 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 tattgtatattaaagcaattcatcttgaaagaacagaaataaatggcaatcactgaggcc 445
Query: 246 aacatttaatcattactcagagctgaaaacccccttttttccttaagtgcgtgggatgcc 305
||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 446 aacatttaatcgttactcagagctgaaaacccccttttttccttaagtgtgtgggatgcc 505
Query: 306 cccagccaaggacagagaagtggacctctcttgcatagcattaggacattatacattcct 365
||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 506 cccagccaaggacagagaagtggacctctcttgcatagcattagggcattagacattcct 565
Query: 366 ctggtcaccctgagaccatccatgtcttggaggaaagccaactttcttcaccagaatggc 425
|||||||| ||||||||| |||||||||||||||| ||||||||||||||||||||||||
Sbjct: 566 ctggtcactctgagaccaaccatgtcttggaggaaggccaactttcttcaccagaatggc 625
Query: 426 tctcccagcaaacccctccttgtctttccttgcaaa 461
||||||||||||||||||||||||||||||||||||
Sbjct: 626 tctcccagcaaacccctccttgtctttccttgcaaa 661
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 461
Length of database: 861
Length adjustment: 10
Effective length of query: 451
Effective length of database: 851
Effective search space: 383801
Effective search space used: 383801
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no195_n08.g1 MSMg01no195_n08.g1 CHROMAT_FILE:
MSMg01no195_n08.g1 PHD_FILE: MSMg01no195_n08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:15:10 2005
(310 letters)
>mm_chr11_108245191_108245900
Length = 710
Score = 484 bits (250), Expect = e-141
Identities = 284/310 (91%), Gaps = 24/310 (7%)
Strand = Plus / Minus
Query: 1 cttcctgaatttcacttacctgagctgctactgagctatactttgtggttgatgttttac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 639 cttcctgaatttcacttacctgagctgctactgagctatactttgtggttgatattttac 580
Query: 61 tggacttcttgaaattaaaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaa 120
||||||||||||||||||| ||| |||| |||||||||
Sbjct: 579 tggacttcttgaaattaaa-----------------------aaa-aaaggaagaaagaa 544
Query: 121 agaaagaaagaaagaaagaaagaaagaaagaaaacaaaacaacaaaccgacagaaatttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 agaaagaaagaaagaaagaaagaaagaaagaaaacaaaacaacaaaccgacagaaatttg 484
Query: 181 tagtttagtaagtctgagatacgaggttataaataaagtaacaaaggagaggcactgtgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 tagtttagtaagtctgagatacgaggttataaataaagtaacaaaggagaggcactgtgt 424
Query: 241 ttccttgcttgtaaggatataatgataaaaatggaaatacctctggcatgccaaaacaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 ttccttgcttgtaaggatataatgataaaaatggaaatacctctggcatgccaaaacaag 364
Query: 301 tgagcacaaa 310
||||||||||
Sbjct: 363 tgagcacaaa 354
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 16
Number of successful extensions: 15
Number of sequences better than 10.0: 1
Number of HSP's gapped: 10
Number of HSP's successfully gapped: 1
Length of query: 310
Length of database: 710
Length adjustment: 9
Effective length of query: 301
Effective length of database: 701
Effective search space: 211001
Effective search space used: 211001
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|