Query= MSMg01no197_a09.b1 MSMg01no197_a09.b1 CHROMAT_FILE:
MSMg01no197_a09.b1 PHD_FILE: MSMg01no197_a09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:16:45 2005
(626 letters)
>mm_chr11_81673890_81674916
Length = 1027
Score = 1114 bits (576), Expect = 0.0
Identities = 612/624 (98%), Gaps = 3/624 (0%)
Strand = Plus / Plus
Query: 5 gaattccctctctgccccaccccc-aattaaaagggctgagctttgccccttctgtctct 63
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccctctctgccccaccccccaattaaaagggctgagctttgccccttctgtctct 264
Query: 64 ttctcttatgcacaaaaggcagcacagggcttgtgcagcctagttactgtcagtgacatt 123
|||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ttctcttaggcagaagaggcagcacagggcttgtgcagcctagttactgtcagtgacatt 324
Query: 124 agcaactttgggctgtttgctctccctttgcttgcctcctggcactgaaacctcattagg 183
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 325 agcaactttgggctgtttgctttccctttgcttgcctcctggcactgaaacctcattagg 384
Query: 184 gctctgacagaaaagagctcatcagttgccaggaaggctactctgggcttccactgcctg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gctctgacagaaaagagctcatcagttgccaggaaggctactctgggcttccactgcctg 444
Query: 244 ttgcctagcaggctgactgagtatgtacactgaccccaggtctccactggaagccagcat 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ttgcctagcaggctgactgagtatgtacactgaccccaggtctccactggaagccagcat 504
Query: 304 cactgaa-gctgatgtaatgtgagccagaagccctcagcaccccctgggtgttcttccat 362
|| | || ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ca-tcaaagctgatgtaatgtgagccagaagccctcagcaccccctgggtgttcttccat 563
Query: 363 cttgcatgagccacccggaaagaacagcagcttgcttgggttctgtttgagggtctactg 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 cttgcatgagccacccggaaagaacagcagcttgcttgggttctgtttgagggtctactg 623
Query: 423 gcaaaggcacagagccaatgaggccggggaaaggtggggtgtttaacctacataggaaaa 482
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 624 gcaaaggcacagagccaatgaggctggggaaaggtggggtgtttaacctacataggaaaa 683
Query: 483 gcttttccctcaagtacggcagtgcatttcctttgcttgctgagtggcaagcaggtcaaa 542
|||||| |||||||||| ||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 684 gctttttcctcaagtactgcagtgcatttcctttgcttgatgagtggcaagcaggtcaaa 743
Query: 543 tgggatgtcccccaggcatccagtgggcagcactttgtttttactccagtgaactctgca 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 tgggatgtcccccaggcatccagtgggcagcactttgtttttactccagtgaactctgca 803
Query: 603 gtcacatggaagaggctgcatagc 626
||||||||||||||||||||||||
Sbjct: 804 gtcacatggaagaggctgcatagc 827
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 626
Length of database: 1027
Length adjustment: 10
Effective length of query: 616
Effective length of database: 1017
Effective search space: 626472
Effective search space used: 626472
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no197_a09.g1 MSMg01no197_a09.g1 CHROMAT_FILE:
MSMg01no197_a09.g1 PHD_FILE: MSMg01no197_a09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:16:45 2005
(144 letters)
>mm_chr11_81797509_81798052
Length = 544
Score = 271 bits (140), Expect = 1e-77
Identities = 143/144 (99%)
Strand = Plus / Minus
Query: 1 acaaaagatatggggatggaatgggaaatgggactaacttttaatctgatccttctcctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 acaaaagatatggggatggaatgggaaatgggactaacttttaatctgatccttctcctg 263
Query: 61 cttaacttgagggctttgtctttctctaagtgaggactagagtctcatgatctgatgggt 120
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 cttaacttgtgggctttgtctttctctaagtgaggactagagtctcatgatctgatgggt 203
Query: 121 gatgtgtgtgtgtgtgtgtgtgtg 144
||||||||||||||||||||||||
Sbjct: 202 gatgtgtgtgtgtgtgtgtgtgtg 179
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 144
Length of database: 544
Length adjustment: 8
Effective length of query: 136
Effective length of database: 536
Effective search space: 72896
Effective search space used: 72896
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
