CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCAGTAGACCCAATCACACAGCCATTTTTAATACTCTCTAACCTCCT
ACTAAAGAGAAGGGAGGCTGAGACATGCAGGTTGTGTAGGATAAGCAACA
TTCTGTGAACTGAAGTGAGAAAGAATACAACAGGCAAATGTCAGGAATTA
TCAATTCATTCATAAGGTTCACTCTTCCTTACAGGTCGGATTAAACAGGA
TATATCCAGTGGAAGAATTCCTCTAGCTACTCTCCATTCATTCTCACATG
CATTCATTATTTAAGTTGATTTTCTTGAATGCACACTGTAAGATGCTTCC
CGCACCAGAGAGGCTAAAAGAGGAATAGGTCCCCATCTTGGGTCACACCA
AAGCAACATCTAGCCAATGTTTAAAGCTGGCCACACTGAGGCTGTGATGC
TAATGATGATGTGGAAAGATCACACTGAGAGATACAGAGATGGGCATAAA
GGAGAGAGAAGAGAAAGAGAGACAGAGACACAGACAGAGACACGGAGAGA
GACAGAGAGACTTAGAGAGACAAAGAGAGGCAGAGAGATAGAGAGAGGCA
GAATGAAACCTGGAAGCTCAGCCTCTCAGTCCAGACCCAGACATCAGACA
CTGGAGTGAAGAAACCTTAAATTCCACATCTAATACAAAAGCCCCAAACC
CTACATGAGTACTATCATCTAAGTCTATGTAACTCCAG

CGAATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXCCTCTTTTTGTTTTTGTTTTTGTT
TTTTCTTTTAAGACAAGTCTTAACCCAGAGGTGAAGTGGTTTAGCTTCCT
GAATCCCAGTCTTCATGGTGTCTTCTAGGTTCCTGTTTAACAGCAGCAGG
ACGTTCAGGGTGGTCTAGCTTTGGTGTTGACTGCACAAGGGAAGGCCTTT
AGCTCTTTGCCACTAGATCTGACACAGATGGGCTCTGTCTATTCTCCTAA
CAAAGGTTCCTTTGCTGTAATGTAATGATTTAAATGACCCTTCTTTTTCC
ATTGAGGTGGCTATACATTTTTCTTTTTTTCTATTAATAAACTATAGTGT
ATTAATTAATTTGTAAGTCTCACTTGGCCATCAAGGTGATTTTTTTTTGT
CAATTTAGATAGGCTGCAGTACCCAGATATGTAGTGTACATTTAAACCAG
AAAACTTTGAGCAAAGCAGCTTACTCTCCACAGTGTGAGCAGGTCTTGTC
TAATCAGGTGAAATCTGTAGAGGAAACAGGCTACACCGAGGTAACATCCC
CCAAGTATATGAGCTAATATATTGACTCTTTCTCAATGTGCACTCACATC
TCATGACCGTAGTCTCCAACAATACTCACTAATGTTTCTAAGCTTTGGAT
CCAATACCACACTCACAAGGGGTTTGACCTTTGGTTT

Query= MSMg01no206_d11.b1 MSMg01no206_d11.b1 CHROMAT_FILE:
MSMg01no206_d11.b1 PHD_FILE: MSMg01no206_d11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:28:19 2005
         (693 letters)



>mm_chr11_8003283_8004373
          Length = 1091

 Score = 1284 bits (664), Expect = 0.0
 Identities = 683/690 (98%), Gaps = 2/690 (0%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattcagtagacccaatcacacagccatttttaatactctctaacctcctactaaaga 63
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcagtagacccaatcacacagccatttttaatactctctaacctcctactaaaga 263

                                                                       
Query: 64  gaagggaggctgagacatgcaggttgtgtaggataagcaacattctgtgaactgaagtga 123
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gaagggaggctgagatatgcaggttgtgtaggataagcaacattctgtgaactgaagtga 323

                                                                       
Query: 124 gaaagaatacaacaggcaaatgtcaggaattatcaattcattcataaggttcactcttcc 183
           ||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 324 gaacgaatacaacaggcaaatgtcaggaattattaattcattcataaggttcactcttcc 383

                                                                       
Query: 184 ttacaggtcggattaaacaggatatatccagtggaagaattcctctagctactctccatt 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ttacaggtcggattaaacaggatatatccagtggaagaattcctctagctactctccatt 443

                                                                       
Query: 244 cattctcacatgcattcattatttaagttgattttcttgaatgcacactgtaagatgctt 303
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 444 cattctcacatgcattcattatttaagttgatcttcttgaatgcacactgtaagatgctt 503

                                                                       
Query: 304 cccgcaccagagaggctaaaagaggaataggtccccatcttgggtcacaccaaagcaaca 363
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 504 cccgcaccagagaggctaaaagaggaataggtccccatcttgggacacaccaaagcaaca 563

                                                                       
Query: 364 tctagccaatgtttaaagctggccacactgaggctgtgatgctaatgatgatgtggaaag 423
           |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||
Sbjct: 564 tctagccaatgtttaaagctggccacactgagg--gtgatgctaatgatgatgtggaaag 621

                                                                       
Query: 424 atcacactgagagatacagagatgggcataaaggagagagaagagaaagagagacagaga 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 atcacactgagagatacagagatgggcataaaggagagagaagagaaagagagacagaga 681

                                                                       
Query: 484 cacagacagagacacggagagagacagagagacttagagagacaaagagaggcagagaga 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 cacagacagagacacggagagagacagagagacttagagagacaaagagaggcagagaga 741

                                                                       
Query: 544 tagagagaggcagaatgaaacctggaagctcagcctctcagtccagacccagacatcaga 603
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 tagagagaggcagaatgaaacctggaagctcagcctctcagtccagacccagacatcaga 801

                                                                       
Query: 604 cactggagtgaagaaaccttaaattccacatctaatacaaaagccccaaaccctacatga 663
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 802 cactggagtgaagaaaccttaaattccacatctaatacaaaagccccaaaccctacatga 861

                                         
Query: 664 gtactatcatctaagtctatgtaactccag 693
           ||||||||||||||||||||||||||||||
Sbjct: 862 gtactatcatctaagtctatgtaactccag 891


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 693
Length of database: 1091
Length adjustment: 10
Effective length of query: 683
Effective length of database: 1081
Effective search space:   738323
Effective search space used:   738323
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)