Query= MSMg01no208_e13.b1 MSMg01no208_e13.b1 CHROMAT_FILE:
MSMg01no208_e13.b1 PHD_FILE: MSMg01no208_e13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:32:03 2005
(313 letters)
>mm_chr11_36344147_36344858
Length = 712
Score = 563 bits (291), Expect = e-165
Identities = 303/309 (98%), Gaps = 5/309 (1%)
Strand = Plus / Minus
Query: 4 ggaattcacccaagagcacgagaacagatcagaagcacagtaaagtcgaagagaagaggg 63
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 ggaattcacccaagagcacaagaacagatcagaagcacagtaaagtcgaagagaagaggg 450
Query: 64 aagctgtcaggtagagatcccgttgctaatgaaacatgcatcacctttccagggagattt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 aagctgtcaggtagagatcccgttgctaatgaaacatgcatcacctttccagggagattt 390
Query: 124 gcactgggaccacgttttgaagtagattggcctaaacacttatgaagtccccatgatgtc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 gcactgggaccacgttttgaagtagattggcctaaacacttatgaagtccccatgatgtc 330
Query: 184 atgtcctttccttggatcaatacccctggcttcagtgacatgtcacaaaggactaaacag 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 atgtcctttccttggatcaatacccctggcttcagtgacatgtcacaaaggactaaacag 270
Query: 244 acaagatgctctttggagacaagaatta--tttattttaggacagcacttgggatggaga 301
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 269 acaagatgctctttggagacaagaattaag---attttaggacagcacttgggatggaga 213
Query: 302 agtgtccta 310
|||||||||
Sbjct: 212 agtgtccta 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 313
Length of database: 712
Length adjustment: 9
Effective length of query: 304
Effective length of database: 703
Effective search space: 213712
Effective search space used: 213712
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no208_e13.g1 MSMg01no208_e13.g1 CHROMAT_FILE:
MSMg01no208_e13.g1 PHD_FILE: MSMg01no208_e13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:32:03 2005
(248 letters)
>mm_chr11_36198318_36198965
Length = 648
Score = 480 bits (248), Expect = e-140
Identities = 248/248 (100%)
Strand = Plus / Plus
Query: 1 ccactttctcccagcctttgtttcaatagttgtcattttgctggagactcacaaatgtca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ccactttctcccagcctttgtttcaatagttgtcattttgctggagactcacaaatgtca 260
Query: 61 agcacaaaacaccacacaattagacaccacagagtttccttaccactgctggaggcttgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agcacaaaacaccacacaattagacaccacagagtttccttaccactgctggaggcttgc 320
Query: 121 tggggccctgagcatgctctgagcaggtatgaattgggggagaattcctcatcagggttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tggggccctgagcatgctctgagcaggtatgaattgggggagaattcctcatcagggttg 380
Query: 181 gtgtccatgatctgatgggaggtgttgctgtctagcaatggcatctggcagctaactggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtgtccatgatctgatgggaggtgttgctgtctagcaatggcatctggcagctaactggt 440
Query: 241 ggaggatt 248
||||||||
Sbjct: 441 ggaggatt 448
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 248
Length of database: 648
Length adjustment: 9
Effective length of query: 239
Effective length of database: 639
Effective search space: 152721
Effective search space used: 152721
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
