Query= MSMg01no209_d21.b1 MSMg01no209_d21.b1 CHROMAT_FILE:
MSMg01no209_d21.b1 PHD_FILE: MSMg01no209_d21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:33:19 2005
(313 letters)
>mm_chr11_88555663_88556376
Length = 714
Score = 480 bits (248), Expect = e-140
Identities = 297/320 (92%), Gaps = 15/320 (4%)
Strand = Plus / Minus
Query: 3 gaattcctgcccccttcccg---aaaaaatctgatactaaaattagtgccggcctcttga 59
|||||||||||||| | | | || ||||||||||||||||||||||||||||||||||
Sbjct: 539 gaattcctgccccc-tgctgtataataaatctgatactaaaattagtgccggcctcttga 481
Query: 60 gccataattcttttcga-ccaataaagaagtgtgtgcgtgcgtgtgtgctcatgctggtg 118
|||||||||||| ||| |||||||||||||||||||||||||||||||||||| ||||
Sbjct: 480 gccataattcttgccgaggcaataaagaagtgtgtgcgtgcgtgtgtgctcatgccggtg 421
Query: 119 tgcttgtgtgcgtccagcttgtctctcaggactgtgggatgtcggataagtaactgggtc 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 tgcttgtgtgcgtccagcttgtctctcaggactgtgggatgtcggataagtaactgggtc 361
Query: 179 tcacaattgattttgtgtgacagcgtctcctcggctccctgcttcctccccctctcctgt 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 tcacaattgattttgtgtgacagcgtctcctcggctccctgcttcctccccctctcctgt 301
Query: 239 gatggaagtgtagggaggaggtagaggggaaatatt-----gttttttgtctttcaggtt 293
|||||||||||||||||||||||||||||||||||| | || ||||||||||
Sbjct: 300 gatggaagtgtagggaggaggtagaggggaaatattgccgcg-----tgcctttcaggtt 246
Query: 294 tgtgtaaatctctgtcacgt 313
||||||||||||||||||||
Sbjct: 245 tgtgtaaatctctgtcacgt 226
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 313
Length of database: 714
Length adjustment: 9
Effective length of query: 304
Effective length of database: 705
Effective search space: 214320
Effective search space used: 214320
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no209_d21.g1 MSMg01no209_d21.g1 CHROMAT_FILE:
MSMg01no209_d21.g1 PHD_FILE: MSMg01no209_d21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:33:19 2005
(291 letters)
>mm_chr11_88342325_88343015
Length = 691
Score = 555 bits (287), Expect = e-162
Identities = 290/291 (99%)
Strand = Plus / Plus
Query: 1 ccaggggcccccaacggaaatgccccatgtcagggaacgtttgttttcatttccttcttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ccaggggcccccaacggaaatgccccatgtcagggaacgtttgttttcatttccttcttc 260
Query: 61 catcaatgaattcgactcatggtaacagcttggggctggagcagatccacacagaagcta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 catcaatgaattcgactcatggtaacagcttggggctggagcagatccacacagaagcta 320
Query: 121 accagaagcatttgttccttgaaataaatctctctttggggaatgacttatatatacatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 accagaagcatttgttccttgaaataaatctctctttggggaatgacttatatatacatc 380
Query: 181 ccagggagggagtacgcacacgtactcacacacgtatgtattatgcatcacagacaaaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccagggagggagtacgcacacgtactcacacacgtatgtattatgcatcacagacaaaat 440
Query: 241 acatgcacaaatcctcaggcacgcagcactgtgctcttcggaagggaaggt 291
|||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 441 acatgcacaaatccccaggcacgcagcactgtgctcttcggaagggaaggt 491
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 691
Length adjustment: 9
Effective length of query: 282
Effective length of database: 682
Effective search space: 192324
Effective search space used: 192324
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
