Query= MSMg01no213_h21.b1 MSMg01no213_h21.b1 CHROMAT_FILE:
MSMg01no213_h21.b1 PHD_FILE: MSMg01no213_h21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:39:31 2005
(376 letters)
>mm_chr11_19999605_20000379
Length = 775
Score = 681 bits (352), Expect = 0.0
Identities = 367/372 (98%), Gaps = 1/372 (0%)
Strand = Plus / Plus
Query: 5 gaattcacttttaggtttccaaaaacaaacacagaacctcagtttccatgttaattttta 64
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcacttttaggtttttaaaaacaaacacagaacctcagtttccatgttaattttta 264
Query: 65 tccatcatgtaactcatcctctaactccctactagagacctagaacacagaagcctacat 124
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tccatcatgtaactcattctctaactccctactagagacctagaacacagaagcctacat 324
Query: 125 cagcaattaacagcaattaacaccagctatcacctttctcagcccctcaaatgtctcaaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 cagcaattaacagcaattaacaccagctatcacctttctcagcccctcaaatgtctcaaa 384
Query: 185 gatgtacaccctactaagtcttgccaaagactgtcccaacaggaccaacaatgttaacta 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gatgtacaccctactaagtcttgccaaagactgtcccaacaggaccaacaatgttaacta 444
Query: 245 cccacaaaacaaatggaaaaaaaaaatcccatttttaaaaagtccctaaactctaaaagt 304
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 445 cccacaaaacaaatggaaaaaaaaa-tcccatttttaaaaagtccctaaactctaaaagt 503
Query: 305 atgttttgtaacttgaaccctggccacattcagaatctaaagtcaattggtgatctctca 364
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 504 atgttttgtaacttgaaccctggccacattcagaatttaaagtcaattggtgatctctca 563
Query: 365 attactctattt 376
||||||||||||
Sbjct: 564 attactctattt 575
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 376
Length of database: 775
Length adjustment: 9
Effective length of query: 367
Effective length of database: 766
Effective search space: 281122
Effective search space used: 281122
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no213_h21.g1 MSMg01no213_h21.g1 CHROMAT_FILE:
MSMg01no213_h21.g1 PHD_FILE: MSMg01no213_h21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:39:31 2005
(289 letters)
>mm_chr11_20078510_20079198
Length = 689
Score = 543 bits (281), Expect = e-159
Identities = 287/289 (99%)
Strand = Plus / Minus
Query: 1 catctaagtgaattgagacatctgtcagagagaaatgtcccaaattacagaggaaaggca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 catctaagtgaattgagacatctgtcagagagaaatgtcccaaattacagaggaaaggca 430
Query: 61 tccctttccacatgataagagcccagtgggggaaaaggagctttctgaagcaccagtgtg 120
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 429 tccctttccacatgataagagcccagtgggggaaaaggagctttctgacgcaccagtgtg 370
Query: 121 gtgtagctgtaactattacttttgtaatgttaaagcagccagttctaggcaagagcctta 180
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 369 gtgtagctgtaactattacttttgtaatgttaaagcagctagttctaggcaagagcctta 310
Query: 181 tggctgagctgcaccctagctctaagtattcttaacataaaaacaaagacaggaagaact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 tggctgagctgcaccctagctctaagtattcttaacataaaaacaaagacaggaagaact 250
Query: 241 tctgctgccaattacaggcaagtaaaagcacatgagaagtctgacagtg 289
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 tctgctgccaattacaggcaagtaaaagcacatgagaagtctgacagtg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 689
Length adjustment: 9
Effective length of query: 280
Effective length of database: 680
Effective search space: 190400
Effective search space used: 190400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
