CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCCTTTAACTCTCTCTGTTGTTCCACCTCAGCAAAACTTGCCTCATGA
CCCCTCTTTTTCCGACTGCAGCCCTCCTTCTGGTTACATCCCCACAGTGC
CACCCAAAATACTGACCACTTGTCTTTTTTTTTTTCAGATCTCAAAAATG
CTGTTTCTTTATTTTTCACAAGTAGACTAATATAAACATCATGCCAAAAG
CACAAGCTTTTATAAGGTAAGGGCACAATTCAGTGTAAAACCCTATCTCA
AATGTTAATTGTTTTAATTGCAGTCCAACCTCACCTTAGGACTCAACGGG
CTCCATCAAGAGTTAAATAGACCTAGCCCCATTAAAAACATCATGTGACT
TTCCCCCCTAACATTATGTTTTTCTGTACTTTAATATAGATGGTTACATC
AAAATTGTCCATTTGAAACCTGGTTTCATTGCAGCATCATATGTTTGATC
CTAATTAATCAACTGGATCATAAGATCAACATGAGAGTTGTTATTCTTTT
CTTTAAAAAATTGGATATTTTCTTTATTTACATTTTAAATGTTGTCTTCT
TTTCCAGTTACCCCCTCCCCTGGGAAACTCCCTATCCCTTCCTCTCCCTG
CTTCTATGAGGGTGTTCCAACACCCACCCACCCCCACTCTCTTCTATCAA
ATTCCCCTACACTGGGGTATCAAGCCTTCACAGGACCAAGGACCTCTCCT
C

ACGATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXCCTCCCAGAGACTTACATGGTCTTGG
TTTGTCCAGGTACTATTCAACCTGAGTAGGTTGAGGGAACTTCAGCTCCC
TCAGTCCTCTTGAGGACTTATTCAATATCTTATTGAATGCTGCAATCAGT
GATTCTCAATAGAACAGTTTGTGCTTGATGTTCATGTGGCAACCCCTTTG
ATGGAGCCACAGAACCATGTGGATGACAGAGGAGCTCATCGAAGAAAGAT
GTGTTGTGAAGTAAAAGGACCTTTAAGAGAGACAAAATACTAAGTTAGTG
AACGTTAACTCAGATATCTAATTGTGCGACGCCGAATACTTAACTTTGGC
TTCGAAATCGCTCCCTTGGTGTTCTTAACAATATAGCCAACATGTACTGG
AAGCCTCCTTTAGTAGATCAAAAAAAGGATGAACAAGTAAGAAATTAAGG
AAGACAGTATACAATTGAATTATCCCTAGTTATCAGAGTTATAACACACA
TTACCACAAATCCGTATAAACCATTAGATAACTGCATGTACCCCATCACA
CCCACATCACATTAAATGTGTTTATGTCAGGAACAGGTAAGAGAGCATGA
CAAGAGGCCCCAAAGGGTTAAAGGATGTGAAATCAAAACAACAACAGCAG
CAACAACAAGAAGCTGTAGTTAGCTTGCCACTAAAACCTCAAATGTCTTA
GAAT

Query= MSMg01no216_p19.b1 MSMg01no216_p19.b1 CHROMAT_FILE:
MSMg01no216_p19.b1 PHD_FILE: MSMg01no216_p19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:44:13 2005
         (707 letters)



>mm_chr11_8058096_8059204
          Length = 1109

 Score = 1307 bits (676), Expect = 0.0
 Identities = 698/706 (98%), Gaps = 2/706 (0%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattcctttaactctctctgttgttccacctcagcaaaacttgcctcatgacccctct 63
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcctttaactctctctgttgttccacctcagcaaaacttgcctcatgacccctct 263

                                                                       
Query: 64  ttttccgactgcagccctccttctggttacatccccacagtgccacccaaaatactgacc 123
           ||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 264 tttcccgactgcagccctccttctggttacatccccagagtgccacccaaaatactgacc 323

                                                                       
Query: 124 acttgtcttttttttttt--cagatctcaaaaatgctgtttctttatttttcacaagtag 181
           ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 acttgtctttttttttttttcagatctcaaaaatgctgtttctttatttttcacaagtag 383

                                                                       
Query: 182 actaatataaacatcatgccaaaagcacaagcttttataaggtaagggcacaattcagtg 241
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 384 actaatataaacatcatgccaaaagcacaggcttttataaggtaagggcacaattcagtg 443

                                                                       
Query: 242 taaaaccctatctcaaatgttaattgttttaattgcagtccaacctcaccttaggactca 301
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 taaaaccctatctcaaatgttaattgttttaattgcagtccaacctcaccttaggactca 503

                                                                       
Query: 302 acgggctccatcaagagttaaatagacctagccccattaaaaacatcatgtgactttccc 361
           || |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 504 actggctccatcaagagttaaatagacctagtcccattaaaaacatcatgtgactttccc 563

                                                                       
Query: 362 ccctaacattatgtttttctgtactttaatatagatggttacatcaaaattgtccatttg 421
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 ccctaacattatgtttttctgtactttaatatagatggttacatcaaaattgtccatttg 623

                                                                       
Query: 422 aaacctggtttcattgcagcatcatatgtttgatcctaattaatcaactggatcataaga 481
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 aaacctggtttcattgcagcatcatatgtttgatcctaattaatcaactggatcataaga 683

                                                                       
Query: 482 tcaacatgagagttgttattcttttctttaaaaaattggatattttctttatttacattt 541
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 tcaacatgagagttgttattcttttctttaaaaaattggatattttctttatttacattt 743

                                                                       
Query: 542 taaatgttgtcttcttttccagttaccccctcccctgggaaactccctatcccttcctct 601
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 744 taaatgttgtcttcttttccagttaccccctcccctgggaaaccccctatcccttcctct 803

                                                                       
Query: 602 ccctgcttctatgagggtgttccaacacccacccacccccactctcttctatcaaattcc 661
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 ccctgcttctatgagggtgttccaacacccacccacccccactctcttctatcaaattcc 863

                                                         
Query: 662 cctacactggggtatcaagccttcacaggaccaaggacctctcctc 707
           ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 864 cctacactggggtatcaagccttcacaggaccaaggacctctcctc 909


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 707
Length of database: 1109
Length adjustment: 10
Effective length of query: 697
Effective length of database: 1099
Effective search space:   766003
Effective search space used:   766003
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)