Query= MSMg01no233_a20.b1 MSMg01no233_a20.b1 CHROMAT_FILE:
MSMg01no233_a20.b1 PHD_FILE: MSMg01no233_a20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:49:41 2005
(320 letters)
>mm_chr11_55492889_55493606
Length = 718
Score = 561 bits (290), Expect = e-164
Identities = 309/316 (97%), Gaps = 2/316 (0%)
Strand = Plus / Minus
Query: 5 gaattctgtccattccctacctcatcctttcttctctatgtgtgaaacaaatgtgatcca 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 gaattctgtccattccctacctcatcctttcttctctatgtgtgaaacaaatgtgatcca 459
Query: 65 gagagagaggacataccgctgttgatccagcctgacaacctggatcaaatccgctagaga 124
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 gagagagaggacatacagctgttgatccagcctgacaacctggatcaaatccgctagaga 399
Query: 125 gtgacttagtttccaaaccaatccctgtcctaaagaaaagcccatggcaggagtgcttgg 184
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 398 gtgacttagtttccaaaccaatccctgtcctaaagaaaagctcatggcaggagtgcttgg 339
Query: 185 gatgggcagatgcacaccatcgcttcacctgtgtgagagaggcgtatgtgcaccacaccc 244
||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 338 gatgggcaggtgcacaccatcgcttcacctgtgt--gagaggcgtatgtgcaccacaccc 281
Query: 245 tctgtgctgtaattcctagccttcaacccaggcagtttaaagctatgtccagaaaaactg 304
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 280 tctgtgctgtaattcctagccttcaacccaggcagtttaaagctatgcccagaaaaactg 221
Query: 305 gccagggcattgtttg 320
||| ||||||||||||
Sbjct: 220 gccggggcattgtttg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 320
Length of database: 718
Length adjustment: 9
Effective length of query: 311
Effective length of database: 709
Effective search space: 220499
Effective search space used: 220499
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no233_a20.g1 MSMg01no233_a20.g1 CHROMAT_FILE:
MSMg01no233_a20.g1 PHD_FILE: MSMg01no233_a20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:49:41 2005
(289 letters)
>mm_chr11_55387443_55388131
Length = 689
Score = 540 bits (279), Expect = e-158
Identities = 285/287 (99%)
Strand = Plus / Plus
Query: 1 tctgaggctctggacttgttgggaaaagatgttgcattgactagtaatgtctgccttggg 60
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 201 tctgaggctctggacttgttgggaaaagatgttgcatcgactagtaatgtctgccttggg 260
Query: 61 tggcgcgggatgtgtggggttcacagcactctgtatcgtgggagagtgtttcctgcgaat 120
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 261 tggcgcgggatgtgtggggttcacagcactctgtgtcgtgggagagtgtttcctgcgaat 320
Query: 121 ctgaaaggaatgttttcctacctttaaagttgggcctgatcctggcgtcatacccagaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctgaaaggaatgttttcctacctttaaagttgggcctgatcctggcgtcatacccagaag 380
Query: 181 tcctccccatgagcttatccaggaagtccgagggtgacataggcttgggtgcggagcggg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcctccccatgagcttatccaggaagtccgagggtgacataggcttgggtgcggagcggg 440
Query: 241 cggcttcagcctctttggaagcagcaaggctaagaagagagagagaa 287
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cggcttcagcctctttggaagcagcaaggctaagaagagagagagaa 487
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 689
Length adjustment: 9
Effective length of query: 280
Effective length of database: 680
Effective search space: 190400
Effective search space used: 190400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
