TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCAAGGCCCATACCTAAACATAATAAAAGCAATCTACAGCAAACCAG
TTGCCAACATCAAAGTAAACGGAGAGAAGCTGGAAGCAATCCCACTAAAA
TCAGGGACTAGACAAGGCTGTCTGTCCACTTTCTCCCTACCTATTCAATA
TAGTACTCGAAATCCTAGCCAGAACATTAGACAACAAAAGGAGGTCAAGG
GGATACAAATTGGAAGGGAAGAAGTCAAAATATCACTTTTTTGCAGTTTA
TATGATAGTATATATAAGTGATCCTAAAAAATCCATCAGAGAACACCTAA
ACCTGATAAACAGCTTCAGTGAAGTAGCTGGATATAAAATAAACTCAAAC
AAATCAGTGGCCTTTTTCTACACAAAGGATAAACAGGCAGAGAAAGAAAT
TAGGGAAACAACACCCTTCATAATAGTCACAAATAATATAAAATGCATTG
GTGTGACTCTAAGGAAATGAAAGATCTATATGATAAGAACTTCAAGTGTC
TGAAGAAAGAAATCTAAGTAGATCTCAGAAGATGGAAAGATCTCCCATTC
TCATTGATTGGCAGGATTAATATAGTCAAAATGGCTATCTTGCTGAAGGC
AATCAACAGATTCAAAGCAATCCCCATCAAAATTCCAACTCAATTCTTCA
GAGTTAGAAGGGC

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXTTTTGTTTTTAATGTTGATCTAAGCA
CAGCTTCCCTGTACTAAATAGTGGAGCTTTTACGATTATCAGACTCACTA
GCAAGATTTTTATATCTTAGTTACATTCAGTGCTCTATGTACTTGGCGAG
AAATTACACAGATATATTTAGGAATGGTACATATTTGTGAAATATCTTGA
TTAGGTATTGGCTACCATATTTAATGGGATGCTATATTCAAACTTTTTAG
TCCACAGTTAAAAAATAAAACCAAAATGTATAGTGAAATTATGCATTTAC
CAAAGTTTTTTATTTTAAGTGATTTCTTAATATTTCATATATAACATACA
TTTAATGTGTTAAACAACAAGTATAAGAGGTTTATATTATATATCTTCCT
ATGCACCTGCAGCGTATTCATCTTGCTTGGTTCACTGCACTGACACTGGC
TGGATCAGAAACGCCTATAATTCTTCCTGCTCTATCAAATCCAACAACAA
CAACACACATAAACACACACAATTATTTAAAAAAAAACAATCTCCAAAAT
CCATAAAGACAGTGGTTAAGTATAGAAATCGTTAATATGTAAATAGGCTA
GGAAAAATCCATACATTTATCTTTAACATAAAACATTTAATGCATTTGAT
ACAAAAGTCTT

Query= MSMg01no235_c06.g1 MSMg01no235_c06.g1 CHROMAT_FILE:
MSMg01no235_c06.g1 PHD_FILE: MSMg01no235_c06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:52:23 2005
         (637 letters)



>mm_chr11_41828164_41829204
          Length = 1041

 Score = 1220 bits (631), Expect = 0.0
 Identities = 637/641 (99%), Gaps = 4/641 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   ttttgtttttaatgttgatctaagcacagcttccctgtactaaatagtggagcttttacg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttttgtttttaatgttgatctaagcacagcttccctgtactaaatagtggagcttttacg 260

                                                                       
Query: 61  attatcagactcactagcaagatttttatatcttagttacattcagtgctctatgtactt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 attatcagactcactagcaagatttttatatcttagttacattcagtgctctatgtactt 320

                                                                       
Query: 121 ggcgagaaattacacagatatatttaggaatggtacatatttgtgaaatatcttgattag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggcgagaaattacacagatatatttaggaatggtacatatttgtgaaatatcttgattag 380

                                                                       
Query: 181 gtattggctaccatatttaatgggatgctatattcaaactttttagtccacagttaaaaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtattggctaccatatttaatgggatgctatattcaaactttttagtccacagttaaaaa 440

                                                                       
Query: 241 ataaaaccaaaatgtatagtgaaattatgcatttaccaaagttttttattttaagtgatt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ataaaaccaaaatgtatagtgaaattatgcatttaccaaagttttttattttaagtgatt 500

                                                                       
Query: 301 tcttaatatttcatatataacatacatttaatgtgttaaacaacaagtataagaggttta 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tcttaatatttcatatataacatacatttaatgtgttaaacaacaagtataagaggttta 560

                                                                       
Query: 361 tattatatatcttcctatgcacctgcagcgtattcatcttgcttggttcactgcactgac 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tattatatatcttcctatgcacctgcagcgtattcatcttgcttggttcactgcactgac 620

                                                                       
Query: 421 actggctggatcagaaacgcctataattcttcctgctctatcaaatccaacaacaacaac 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 actggctggatcagaaacgcctataattcttcctgctctatcaaatccaacaacaacaac 680

                                                                       
Query: 481 acacataaacacacacaattatttaaaaaaaaa----caatctccaaaatccataaagac 536
           |||||||||||||||||||||||||||||||||    |||||||||||||||||||||||
Sbjct: 681 acacataaacacacacaattatttaaaaaaaaaaaaacaatctccaaaatccataaagac 740

                                                                       
Query: 537 agtggttaagtatagaaatcgttaatatgtaaataggctaggaaaaatccatacatttat 596
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 agtggttaagtatagaaatcgttaatatgtaaataggctaggaaaaatccatacatttat 800

                                                    
Query: 597 ctttaacataaaacatttaatgcatttgatacaaaagtctt 637
           |||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 ctttaacataaaacatttaatgcatttgatacaaaagtctt 841


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 637
Length of database: 1041
Length adjustment: 10
Effective length of query: 627
Effective length of database: 1031
Effective search space:   646437
Effective search space used:   646437
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)