Query= MSMg01no260_j05.b1 MSMg01no260_j05.b1 CHROMAT_FILE:
MSMg01no260_j05.b1 PHD_FILE: MSMg01no260_j05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:56:43 2005
(323 letters)
>mm_chr11_106558275_106558997
Length = 723
Score = 553 bits (286), Expect = e-162
Identities = 312/328 (95%), Gaps = 15/328 (4%)
Strand = Plus / Plus
Query: 4 ggaattccatgagccttcc----ttctcgttggaggtcttatctatccttcgcttgacaa 59
|||||||||||||| | |||||||||||||||||||||||||||||||||||||
Sbjct: 203 ggaattccatgagca---caaagttctcgttggaggtcttatctatccttcgcttgacaa 259
Query: 60 actttgtccccacttctaatttttcaattttaaaaaagatcggtggcttttcttcttgca 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 actttgtccccacttctaatttttcaattttaaaaaagatcggtggcttttcttcttgca 319
Query: 120 aggaacaattgaccgtcacgaccccgccttctgtcacctcctttttgtccagtgtcacct 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 aggaacaattgaccgtcacgaccccgccttctgtcacctcctttttgtccagtgtcacct 379
Query: 180 tgggcttggatacgcctttggagaaggagaaagtacacttaggatcaattccgcataacg 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tgggcttggatacgcctttggagaaggagaaagtacacttaggatcaattccgcataacg 439
Query: 240 gccccatcaccctcatctgtcactgtggctgatcagcatcatttt----cctttattccc 295
||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 440 gccccatcaccctcatctgtcactgtggctgatcagcatca----gggccctttattccc 495
Query: 296 tgaagattcagtcttacctaccccaggg 323
||||||||||||||||||||||||||||
Sbjct: 496 tgaagattcagtcttacctaccccaggg 523
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 323
Length of database: 723
Length adjustment: 9
Effective length of query: 314
Effective length of database: 714
Effective search space: 224196
Effective search space used: 224196
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no260_j05.g1 MSMg01no260_j05.g1 CHROMAT_FILE:
MSMg01no260_j05.g1 PHD_FILE: MSMg01no260_j05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:56:43 2005
(340 letters)
>mm_chr11_106729477_106730216
Length = 740
Score = 648 bits (335), Expect = 0.0
Identities = 338/339 (99%)
Strand = Plus / Minus
Query: 1 aaaacatagtttgctgcttttagccatattctgaaatatatttaggatgctaggatatta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 aaaacatagtttgctgcttttagccatattctgaaatatatttaggatgctaggatatta 571
Query: 61 aaaaaattaaattgtatactatttataattaccaagttattcatgtagctgttttgcctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 aaaaaattaaattgtatactatttataattaccaagttattcatgtagctgttttgcctt 511
Query: 121 ttaggtatatcggaaagtctgattcagttacgatcagcgtatggaatcataagaagatcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 ttaggtatatcggaaagtctgattcagttacgatcagcgtatggaatcataagaagatcc 451
Query: 181 ataagaagcaaggtgctggatttcttggttgtgttcgtcttctttccaatgccatcaacc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 ataagaagcaaggtgctggatttcttggttgtgttcgtcttctttccaatgccatcaacc 391
Query: 241 gcctcaaggacactggttgtgagtaaaatttttttttttagttagaaaatatgtatgaga 300
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 390 gcctcaaggacactggttgtgagtaaaaattttttttttagttagaaaatatgtatgaga 331
Query: 301 atttttatgtagtaggtgtccaaaacttaagttcccatg 339
|||||||||||||||||||||||||||||||||||||||
Sbjct: 330 atttttatgtagtaggtgtccaaaacttaagttcccatg 292
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 340
Length of database: 740
Length adjustment: 9
Effective length of query: 331
Effective length of database: 731
Effective search space: 241961
Effective search space used: 241961
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
