Query= MSMg01no262_b05.b1 MSMg01no262_b05.b1 CHROMAT_FILE:
MSMg01no262_b05.b1 PHD_FILE: MSMg01no262_b05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:58:37 2005
(444 letters)
>mm_chr11_18960235_18961078
Length = 844
Score = 795 bits (411), Expect = 0.0
Identities = 436/457 (95%), Gaps = 20/457 (4%)
Strand = Plus / Minus
Query: 5 gaattcccatttctgaataacttctacccaggcatgagccatgcatgcatttgctgcaga 64
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 730 gaattcccatttctgaataacttctacccaggcatgagccatgcatgcatctgctgcaga 671
Query: 65 cttcctgtg--------------------cttctagccactgtatcaggaaaattccttc 104
||||||||| |||||||||||||||||||||||||||||||
Sbjct: 670 cttcctgtgcagcttaccatcatatctttcttctagccactgtatcaggaaaattccttc 611
Query: 105 ttctttggtgcttttctgaaaccccaaattcactgatttcccagcaagcctctctcaaag 164
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 ttctttggtgcttttctgaaaccccaaattcactgatttcccagcaagcctctctcaaag 551
Query: 165 aactacttgatatatcttctattgcaagagaagagcagagccacagatcagtcatcttgg 224
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 aactacttgatatatcttctattgcaagagaagagcagagccacagatcagtcatcttgg 491
Query: 225 agtttttggtaatgacatccacagtggagcatgtgcataccaccagtgtctactgagaga 284
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 agtttttggtaatgacatccacagtggagcatgtgcataccaccagtgtctactgagaga 431
Query: 285 cagagcatggaccaaacaatcaccagaaacagacaaacaaacaactcatccacagctatc 344
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 cagagcatggaccaaacaatcaccagaaacagacaaacaaacaactcatccacagctatc 371
Query: 345 ataggggctggaatgcccggggttgagagccaccatccatgggtgcagagaactgaactg 404
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 ataggggctggaatgcccggggttgagagccaccatccatgggtgcagagaactgaactg 311
Query: 405 ggtttttttgattgttgggtgttcgtttgtttgtttg 441
|||||||||||||||||||||||||||||||||||||
Sbjct: 310 ggtttttttgattgttgggtgttcgtttgtttgtttg 274
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 444
Length of database: 844
Length adjustment: 10
Effective length of query: 434
Effective length of database: 834
Effective search space: 361956
Effective search space used: 361956
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no262_b05.g1 MSMg01no262_b05.g1 CHROMAT_FILE:
MSMg01no262_b05.g1 PHD_FILE: MSMg01no262_b05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:58:37 2005
(122 letters)
>mm_chr11_18787120_18787641
Length = 522
Score = 236 bits (122), Expect = 4e-67
Identities = 122/122 (100%)
Strand = Plus / Plus
Query: 1 tccgtctgcgtagttctttatgtaatctcggctgacaggagaaacttagtctgctcactt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tccgtctgcgtagttctttatgtaatctcggctgacaggagaaacttagtctgctcactt 260
Query: 61 tctgtttaattctttgtaaagacattttatgggtagggaaagtgatttttttgttgttgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tctgtttaattctttgtaaagacattttatgggtagggaaagtgatttttttgttgttgt 320
Query: 121 tt 122
||
Sbjct: 321 tt 322
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 122
Length of database: 522
Length adjustment: 8
Effective length of query: 114
Effective length of database: 514
Effective search space: 58596
Effective search space used: 58596
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
