Query= MSMg01no262_o09.b1 MSMg01no262_o09.b1 CHROMAT_FILE:
MSMg01no262_o09.b1 PHD_FILE: MSMg01no262_o09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:59:39 2005
(603 letters)
>mm_chr11_22751261_22752265
Length = 1005
Score = 1087 bits (562), Expect = 0.0
Identities = 594/606 (98%), Gaps = 4/606 (0%)
Strand = Plus / Minus
Query: 1 atatttagaaaaaacagaaaaaaaaaaccccccaaacaatagaaaatgatacaatacaag 60
||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||
Sbjct: 805 atatttagaaaaaacagaaaaaaaaaa-accccaaacaatagaaaatgatacaataaaag 747
Query: 61 taacacaagttagagatacaatgtgactctagcccttcactgtgttagtgtagcaggctc 120
|||||||||||| ||||||||||||||||||||||||||||||| |||||| ||||||||
Sbjct: 746 taacacaagttaaagatacaatgtgactctagcccttcactgtgctagtgtggcaggctc 687
Query: 121 tgtaggacaagctgagtgcccagccatctttcagaggcatctttctgaggctttgatagg 180
||||| ||||||||||||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 686 tgtagcacaagctgagtgcccagccatgtttcagaggcatctttctgaggccttgatagg 627
Query: 181 taccagttgtaccttgtttgctttgcttgtttaaatgagaggcaaccattttactattct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 taccagttgtaccttgtttgctttgcttgtttaaatgagaggcaaccattttactattct 567
Query: 241 ttgccacataaggaattacctctcttcaaatgaacttaaaatatctcctatttttaacta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 ttgccacataaggaattacctctcttcaaatgaacttaaaatatctcctatttttaacta 507
Query: 301 aaaatatactcctatttttaaccgagtgttttcttttgagtttttgttctcaaggttctg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 aaaatatactcctatttttaaccgagtgttttcttttgagtttttgttctcaaggttctg 447
Query: 361 ttgggtcttctgttaaaaag---aaaaaaaaaaactctttataatggaaattttcaaatc 417
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 446 ttgggtcttctgttaaaaaggaaaaaaaaaaaaactctttataatggaaattttcaaatc 387
Query: 418 cggtaatgtgttgaagcctcgggcaatcctgttcttgccccaccctacccatatcctgtc 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 cggtaatgtgttgaagcctcgggcaatcctgttcttgccccaccctacccatatcctgtc 327
Query: 478 tgctgcaggctctaagccgaggggagagggaagtgtcctgggtagggtgaggcagataaa 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 tgctgcaggctctaagccgaggggagagggaagtgtcctgggtagggtgaggcagataaa 267
Query: 538 tcccttcagccctagagggtggattgctgcagccctagttcctataatagtagtacatgc 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 tcccttcagccctagagggtggattgctgcagccctagttcctataatagtagtacatgc 207
Query: 598 tgggat 603
||||||
Sbjct: 206 tgggat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 603
Length of database: 1005
Length adjustment: 10
Effective length of query: 593
Effective length of database: 995
Effective search space: 590035
Effective search space used: 590035
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no262_o09.g1 MSMg01no262_o09.g1 CHROMAT_FILE:
MSMg01no262_o09.g1 PHD_FILE: MSMg01no262_o09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:59:39 2005
(553 letters)
>mm_chr11_22617037_22617985
Length = 949
Score = 719 bits (372), Expect = 0.0
Identities = 415/432 (96%), Gaps = 9/432 (2%)
Strand = Plus / Plus
Query: 1 cttactctgccctcacttgcctcaaaagagatataccggtttgcaaataatgctgggctt 60
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 201 cttactctgccctcacttgcctcaa--gagatataccggtttgcaaataatgctgggctt 258
Query: 61 agtggtcagctgccctgccagtgactttccacaagcaagccataacacaatttgcatgct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 agtggtcagctgccctgccagtgactttccacaagcaagccataacacaatttgcatgct 318
Query: 121 aatttatatgcctttctcccttctaacctttgttagtttatccctggagcattcaaagtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 aatttatatgcctttctcccttctaacctttgttagtttatccctggagcattcaaagtg 378
Query: 181 gacgggagattttttttttttccatcccctttctggagtgcttagcaagctctcagtgaa 240
| ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||
Sbjct: 379 aaggggagattttttttttt--catcccctttctggaatgcttagcaagctctcagtgaa 436
Query: 241 agagtgttgacctgcaccaattttttt---ttgttgttgttttttcgagccagggtttct 297
|||||| |||||||||||||||||||| ||||| |||||||| |||||||||||||||
Sbjct: 437 agagtgatgacctgcaccaatttttttgttttgtt-ttgttttt-cgagccagggtttct 494
Query: 298 ctgtatagccctggctgtcctggaactcactctgtagaccaggctggccttgaactcaga 357
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 495 ctgtatagccctggctgtcctggaactcacactgtagaccaggctggccttgaactcaga 554
Query: 358 aatccgcctgcctctgcctcctgagtgctgagattaaaggtgtgcaccaccacacctggc 417
||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| |
Sbjct: 555 aatccacctgcctctgcctcctgagtgctgagattaaaggtgtgcaccaccatacctgac 614
Query: 418 atatgatttttt 429
||||||||||||
Sbjct: 615 atatgatttttt 626
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 553
Length of database: 949
Length adjustment: 10
Effective length of query: 543
Effective length of database: 939
Effective search space: 509877
Effective search space used: 509877
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
