Query= MSMg01no263_k02.b1 MSMg01no263_k02.b1 CHROMAT_FILE:
MSMg01no263_k02.b1 PHD_FILE: MSMg01no263_k02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:00:36 2005
(692 letters)
>mm_chr11_91387353_91388444
Length = 1092
Score = 1299 bits (672), Expect = 0.0
Identities = 684/688 (99%)
Strand = Plus / Plus
Query: 5 gaattctttgcccacgccatccgttttataatttatatcaccacccattttcttccaagt 64
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctttgcccacgtcatccgttttataatttatatcaccacccattttcttccaagt 264
Query: 65 aatcttggctcccagatgactgctctgttacaaattcttacttattcattccatttatat 124
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aatcttggctccaagatgactgctctgttacaaattcttacttattcattccatttatat 324
Query: 125 atgctcatgaaaaaatctgctcagtccttctgctctaagaaagagaagaaaatacattag 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 atgctcatgaaaaaatctgctcagtccttctgctctaagaaagagaagaaaatacattag 384
Query: 185 aagatccttaaaaatagaattctgagcaaacactttgcataaaacaaagtatcaaatata 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aagatccttaaaaatagaattctgagcaaacactttgcataaaacaaagtatcaaatata 444
Query: 245 gatgttgaagcataatatattattctcaagttttggcatgttgctattattctctggcaa 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gatgttgaagcataatatattattctcaagttttggcatgttgctattattctctggcaa 504
Query: 305 gcaaaatacattttaaaattaaaaattggaatttattcccatatctattcaatatagtac 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gcaaaatacattttaaaattaaaaattggaatttattcccatatctattcaatatagtac 564
Query: 365 tctaagtgccacaacaataagacaacaaaaacagatcaaggggatacaaataggcaaaga 424
||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tctaagtgctagaacaataagacaacaaaaacagatcaaggggatacaaataggcaaaga 624
Query: 425 agaaataaaggtatcactatttgcagatgatatgatagtatacgtaagtgaccccaaaaa 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 agaaataaaggtatcactatttgcagatgatatgatagtatacgtaagtgaccccaaaaa 684
Query: 485 ttctaccagagaatttctccaactgataaacaactccagcaaagtggctggatataaaat 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 ttctaccagagaatttctccaactgataaacaactccagcaaagtggctggatataaaat 744
Query: 545 taactcaaataaatcagtagcccttctttatacaaaagataaacaggatgagaaagaaat 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 taactcaaataaatcagtagcccttctttatacaaaagataaacaggatgagaaagaaat 804
Query: 605 tagggaaacaactcccttcacaatagccacatataatataaaatatcttgagataactct 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 tagggaaacaactcccttcacaatagccacatataatataaaatatcttgagataactct 864
Query: 665 aaccaaccaaatgaaagacctgtatgac 692
||||||||||||||||||||||||||||
Sbjct: 865 aaccaaccaaatgaaagacctgtatgac 892
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 692
Length of database: 1092
Length adjustment: 10
Effective length of query: 682
Effective length of database: 1082
Effective search space: 737924
Effective search space used: 737924
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no263_k02.g1 MSMg01no263_k02.g1 CHROMAT_FILE:
MSMg01no263_k02.g1 PHD_FILE: MSMg01no263_k02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:00:36 2005
(299 letters)
>mm_chr11_91557215_91557913
Length = 699
Score = 555 bits (287), Expect = e-162
Identities = 297/301 (98%), Gaps = 2/301 (0%)
Strand = Plus / Minus
Query: 1 tatggcttggctgtattttctgcctcagaatatcttgcaagactagaatacaagcatgtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 tatggcttggctgtattttctgcctcagaatatcttgcaagactagaatacaagcatgtg 275
Query: 61 aaggatgcctgtggtctattccaaggctatattgagaagtgaatacttttcagattgggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 aaggatgcctgtggtctattccaaggctatattgagaagtgaatacttttcagattgggg 215
Query: 121 ttattatgttggagtaagacagagtattt--ctctgtagctcagactggcatccaactta 178
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 214 ttattatgttggagtaagacagagtatttttctctgtagctcagactggcatccaactta 155
Query: 179 gtaggtagcctaggttggccttaactttgtggtaaaatcctccctcagccttctgagcac 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 gtaggtagcctaggttggccttaactttgtggtaaaatcctccctcagccttctgagcac 95
Query: 239 tgggatgataggggtgtgtcacctcattcattttcatagattctttttctattactatat 298
||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||
Sbjct: 94 tgggatgataggggtgtgtcacctcattcattttcatagattctttttcaattactgtat 35
Query: 299 a 299
|
Sbjct: 34 a 34
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 299
Length of database: 699
Length adjustment: 9
Effective length of query: 290
Effective length of database: 690
Effective search space: 200100
Effective search space used: 200100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
