Query= MSMg01no263_k18.b1 MSMg01no263_k18.b1 CHROMAT_FILE:
MSMg01no263_k18.b1 PHD_FILE: MSMg01no263_k18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:00:39 2005
(324 letters)
>mm_chr11_99131391_99132114
Length = 724
Score = 584 bits (302), Expect = e-171
Identities = 314/318 (98%), Gaps = 2/318 (0%)
Strand = Plus / Plus
Query: 8 gaattcactt-catgtctccaagggccaggtccattagttaagcaggacttaaacttctg 66
||||||| || ||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 208 gaattca-ttccatgtctccaagggccaggtccagtagttaagcaggacttaaacttctg 266
Query: 67 ttaacattgacataattctgcacttgtagcaaaatgcccacatgatttatttaggaagca 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 ttaacattgacataattctgcacttgtagcaaaatgcccacatgatttatttaggaagca 326
Query: 127 aatataccaacctggacctgccgtcctaggtaagcctggggatattatgataatattagc 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 aatataccaacctggacctgccgtcctaggtaagcctggggatattatgataatattagc 386
Query: 187 tgtattttaggcttagccttaaaaacatttttttgaggtttagttctttttattttgtac 246
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 tgtattttaggcttacccttaaaaacatttttttgaggtttagttctttttattttgtac 446
Query: 247 atatgggaattttacctgcatatacatctatgtaccacatgtgtgcttgatgcccacaga 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 atatgggaattttacctgcatatacatctatgtaccacatgtgtgcttgatgcccacaga 506
Query: 307 aggcagagagggcaccag 324
||||||||||||||||||
Sbjct: 507 aggcagagagggcaccag 524
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 324
Length of database: 724
Length adjustment: 9
Effective length of query: 315
Effective length of database: 715
Effective search space: 225225
Effective search space used: 225225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no263_k18.g1 MSMg01no263_k18.g1 CHROMAT_FILE:
MSMg01no263_k18.g1 PHD_FILE: MSMg01no263_k18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:00:39 2005
(292 letters)
>mm_chr11_99233767_99234457
Length = 691
Score = 516 bits (267), Expect = e-151
Identities = 285/291 (97%), Gaps = 1/291 (0%)
Strand = Plus / Minus
Query: 1 atttaaacccaccccccctcccctcaaggtatgaaaacgaactcacccttcaccaaaatg 60
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 atttaaaccca-cccccctcccctcaaggtatgaaaacgaactcacccttcaccaaaatg 432
Query: 61 tcgaggcagacatcaatgggttgcggcgcgtccttgacgagctaaccctctgcaggacgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 431 tcgaggcagacatcaatgggttgcggcgcgtccttgacgagctaaccctctgcagaacgg 372
Query: 121 accaagagctgcagtacgaatccctgagtgaggagatgacttatctcaagaagaaccacg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 accaagagctgcagtacgaatccctgagtgaggagatgacttatctcaagaagaaccacg 312
Query: 181 aagaggtaggagaagcttagctctaaccccaacacagctctgcccgggaaaagtctagcg 240
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 311 aagaggtaggagaagcttcgctctaaccccaacacagctctgcccgggaaaagtctaggg 252
Query: 241 agggaagctgttgaaatcccaggggagaaacctgagatatcaacactttga 291
||| ||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 251 aggcaagctgttgaaattccaggggagaaacctgagatatcaacactttga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 292
Length of database: 691
Length adjustment: 9
Effective length of query: 283
Effective length of database: 682
Effective search space: 193006
Effective search space used: 193006
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
