Query= MSMg01no264_b05.b1 MSMg01no264_b05.b1 CHROMAT_FILE:
MSMg01no264_b05.b1 PHD_FILE: MSMg01no264_b05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:01:10 2005
(256 letters)
>mm_chr11_37153197_37153850
Length = 654
Score = 447 bits (231), Expect = e-130
Identities = 247/253 (97%), Gaps = 2/253 (0%)
Strand = Plus / Plus
Query: 4 ggaattctaacatttgtatgattcttcatatctcatcatttttaggattttactaatatg 63
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctaacatttgtatgactcttcatatctcatcatttttaggattttactaatatg 263
Query: 64 attactttatttatcagatatttaaataatttttgttacaagtcatttttttttaagtgc 123
|||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 264 attactttatttatcaaatatttaaataatttttgttacaagtcattttttt--aagtgc 321
Query: 124 cacaggatcaaatataaagatttgcatatcctgagtcagcttcttggagctgtatttttc 183
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 322 cacaggatcaaatataaagatttgcatatcctgagtcagcttcttggaactgtatttttc 381
Query: 184 agcccagcatttcctttttatagtaggggttgtctaagttgtattctagtgtgttaactg 243
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 agcccagcattttctttttatagtaggggttgtctaagttgtattctagtgtgttaactg 441
Query: 244 atatctggtagaa 256
|||||||||||||
Sbjct: 442 atatctggtagaa 454
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 256
Length of database: 654
Length adjustment: 9
Effective length of query: 247
Effective length of database: 645
Effective search space: 159315
Effective search space used: 159315
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no264_b05.g1 MSMg01no264_b05.g1 CHROMAT_FILE:
MSMg01no264_b05.g1 PHD_FILE: MSMg01no264_b05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:01:10 2005
(172 letters)
>mm_chr11_37322501_37323072
Length = 572
Score = 317 bits (164), Expect = 2e-91
Identities = 170/172 (98%)
Strand = Plus / Minus
Query: 1 ttctgtgtgtcttttctatattttatctcctctgatttttccctattaacaatcataaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 ttctgtgtgtcttttctatattttatctcctctgatttttccctattaacaatcataaac 313
Query: 61 tttatatcacacagcaattctccctctatgtatgctcccttaatgatctcacctttcagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 tttatatcacacagcaattctccctctatgtatgctcccttaatgatctcacctttcagt 253
Query: 121 tcttcctttgattagaaatacttaagatcacacagcagtctttctcctgtgt 172
|||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 252 ccttcctttgattagaaatacttaagatcacgcagcagtctttctcctgtgt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 172
Length of database: 572
Length adjustment: 8
Effective length of query: 164
Effective length of database: 564
Effective search space: 92496
Effective search space used: 92496
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
