Query= MSMg01no264_g03.b1 MSMg01no264_g03.b1 CHROMAT_FILE:
MSMg01no264_g03.b1 PHD_FILE: MSMg01no264_g03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:01:32 2005
(360 letters)
>mm_chr11_83497895_83498654
Length = 760
Score = 658 bits (340), Expect = 0.0
Identities = 355/360 (98%)
Strand = Plus / Minus
Query: 1 aaagcatagattagaagtacaaattccactctgcctacagctagagcctaaatgaagtaa 60
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 560 aaagcatagattagaagtacaaattccactctgcctacagttagagcctaaatgaagtaa 501
Query: 61 ctttaggaatttcaggactattcctatccttaaaagtcagcactggtatttctgaggggc 120
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 ctttaggaatttcaggactgttcctatccttaaaagtcagcactggtatttctgaggggc 441
Query: 121 ttcagccttcccctggccttagctgggtgggctacaagcctgttcagttttgactgttgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ttcagccttcccctggccttagctgggtgggctacaagcctgttcagttttgactgttgg 381
Query: 181 ttctctcgtcattgctggagtgtgcaggatgctgatgaaaggctcagtgatgaaaaggca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ttctctcgtcattgctggagtgtgcaggatgctgatgaaaggctcagtgatgaaaaggca 321
Query: 241 aacccttcctgttcagaggagaatctcgccaggaaacattcagcatctgttaagtttctt 300
|||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||
Sbjct: 320 aacccttcctgttcagaggagaatctcgccaggaaacatttagcatctgttatgtttctt 261
Query: 301 catccccccacttcatctgccaatggtaagtgtctcatgtctgtctctatcacagcactg 360
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 260 catccccccacttcatctgccaatggtaagtgtcccatgtctgtctctatcacagcactg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 360
Length of database: 760
Length adjustment: 9
Effective length of query: 351
Effective length of database: 751
Effective search space: 263601
Effective search space used: 263601
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no264_g03.g1 MSMg01no264_g03.g1 CHROMAT_FILE:
MSMg01no264_g03.g1 PHD_FILE: MSMg01no264_g03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:01:32 2005
(290 letters)
>mm_chr11_83306485_83307173
Length = 689
Score = 522 bits (270), Expect = e-153
Identities = 285/290 (98%), Gaps = 1/290 (0%)
Strand = Plus / Plus
Query: 1 tgtccttcagtagagacatgtggtcattgggttctttgtttgttttaactcaccagttga 60
|||||||||||||||||||||||||||||||||||||||||||||||| | | |||||||
Sbjct: 201 tgtccttcagtagagacatgtggtcattgggttctttgtttgttttaatt-atcagttga 259
Query: 61 aagctgaatgtgagcacttgggagaattgaagtgagttagaggccagtttggggtccctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 aagctgaatgtgagcacttgggagaattgaagtgagttagaggccagtttggggtccctt 319
Query: 121 gtaccaggcctgccaagttatatataaaatgaaagactgtctacaaacgaaaaatacaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 gtaccaggcctgccaagttatatataaaatgaaagactgtctacaaacgaaaaatacaca 379
Query: 181 agcccctaaaacaaaaactcaaaggaatagtatgcttaagaaattttcttttttaacttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 agcccctaaaacaaaaactcaaaggaatagtatgcttaagaaattttcttttttaacttt 439
Query: 241 ttatttcttatttctatctgggtattcattcttcttgtatgtaagtttgt 290
||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 440 ttatttcttataactatctgggtattcattcttcttgtatgtaagtttgt 489
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 290
Length of database: 689
Length adjustment: 9
Effective length of query: 281
Effective length of database: 680
Effective search space: 191080
Effective search space used: 191080
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
