Query= MSMg01no264_l01.b1 MSMg01no264_l01.b1 CHROMAT_FILE:
MSMg01no264_l01.b1 PHD_FILE: MSMg01no264_l01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:01:57 2005
(314 letters)
>mm_chr11_90234839_90235552
Length = 714
Score = 584 bits (302), Expect = e-171
Identities = 308/310 (99%)
Strand = Plus / Minus
Query: 5 gaattcactcatactaagcataatagtggttcttagaagttagtctgttcctaagagggt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 gaattcactcatactaagcataatagtggttcttagaagttagtctgttcctaagagggt 455
Query: 65 tgaatgatgggatggcattaccaaaatatgtcttcttttattctccatcagcccttccat 124
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 454 tgaatgatgggatggcattaccaaaagatgtcttcttttattctccatcagcccttccat 395
Query: 125 cttgactacaggcagcttaaaaatgagttgggcatatcttagtggccagaaaccgtggca 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 cttgactacaggcagcttaaaaatgagttgggcatatcttagtggccagaaaccgtggca 335
Query: 185 atcaggatgaaatcactatcaaagcagaaataacaagctttgataaagccatccagggaa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 atcaggatgaaatcactatcaaagcagaaataacaagctttgataaagccatccagggaa 275
Query: 245 acacagtcctgagagcatccacacactcgtctggacccttatgccaccaaattagactgg 304
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 acacagtcctgagagcgtccacacactcgtctggacccttatgccaccaaattagactgg 215
Query: 305 gtttgaaatg 314
||||||||||
Sbjct: 214 gtttgaaatg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 314
Length of database: 714
Length adjustment: 9
Effective length of query: 305
Effective length of database: 705
Effective search space: 215025
Effective search space used: 215025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no264_l01.g1 MSMg01no264_l01.g1 CHROMAT_FILE:
MSMg01no264_l01.g1 PHD_FILE: MSMg01no264_l01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:01:57 2005
(191 letters)
>mm_chr11_90096463_90097058
Length = 596
Score = 337 bits (174), Expect = 4e-97
Identities = 189/196 (96%), Gaps = 5/196 (2%)
Strand = Plus / Plus
Query: 1 gcaaccagcaaactctcgtctcagatgcagaactaatatccctcaga----t-ttaccgc 55
||||||||||||||||||||||||||||||||||||||| ||||||| | |||||||
Sbjct: 201 gcaaccagcaaactctcgtctcagatgcagaactaatattcctcagaagaatgttaccgc 260
Query: 56 agagacagtggaagtgaaacaaaaagacttggtgagtcagacagtattgtgctgtgattt 115
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agagacagtggaagtgaaacaaaaagacttggtgagtcagacagtattgtgctgtgattt 320
Query: 116 tgagtctgaaatacctcccataggttcatgggttgaactcttgtttctcagatggtagcg 175
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 321 tgagtctgaaatacctcccataggttcatgggttgaactcttgtttctcaaatggtagcg 380
Query: 176 ccatactggggtgggg 191
||||||||||||||||
Sbjct: 381 ccatactggggtgggg 396
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 191
Length of database: 596
Length adjustment: 8
Effective length of query: 183
Effective length of database: 588
Effective search space: 107604
Effective search space used: 107604
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
