Query= MSMg01no264_l11.b1 MSMg01no264_l11.b1 CHROMAT_FILE:
MSMg01no264_l11.b1 PHD_FILE: MSMg01no264_l11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:01:59 2005
(334 letters)
>mm_chr11_90741011_90741744
Length = 734
Score = 480 bits (248), Expect = e-140
Identities = 263/268 (98%)
Strand = Plus / Plus
Query: 67 tttatttatttatttatttatttctttatttatttatttatttatactttttatggaaac 126
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 267 tttatttatttatttatttatttatttatttatttatttatttatactttttatggaaac 326
Query: 127 tagtaagtaaaagatcaagatgccaatgggcttagttgtctggtgtgggctcctcacaag 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 tagtaagtaaaagatcaagatgccaatgggcttagttgtctggtgtgggctcctcacaag 386
Query: 187 actgaatgcagaagattatgtgactaatacagcttgaagcctcttttactggggcttcag 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 actgaatgcagaagattatgtgactaatacagcttgaagcctcttttactggggcttcag 446
Query: 247 tccacactcatcaggaaggagctttgatgctgccttgggacatttcctggaaagaagtaa 306
||||||||| ||||||||||||||||| |||||||||||||||||||||| |||||||||
Sbjct: 447 tccacactcgtcaggaaggagctttgacgctgccttgggacatttcctgggaagaagtaa 506
Query: 307 agaagcccctgttccctgcaggtgagga 334
||||||||||||||||||||| ||||||
Sbjct: 507 agaagcccctgttccctgcagatgagga 534
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 334
Length of database: 734
Length adjustment: 9
Effective length of query: 325
Effective length of database: 725
Effective search space: 235625
Effective search space used: 235625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no264_l11.g1 MSMg01no264_l11.g1 CHROMAT_FILE:
MSMg01no264_l11.g1 PHD_FILE: MSMg01no264_l11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:01:59 2005
(295 letters)
>mm_chr11_90937379_90938076
Length = 698
Score = 501 bits (259), Expect = e-146
Identities = 288/299 (96%), Gaps = 5/299 (1%)
Strand = Plus / Minus
Query: 1 tctcagggaagcatataatgttccaaacataatgatcccattaaacattac-aac---ca 56
||||||||||||||||||||||||||||||||||||||||||||||| || ||| ||
Sbjct: 498 tctcagggaagcatataatgttccaaacataatgatcccattaaaca-aacaaacaaaca 440
Query: 57 aacaaacaagacacacccttaaacatacaggaaacaacaacacactatctagaagaaaaa 116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 aacaaacaagacacacccttaaacatacaggaaacaacaacacactatctagaagaaaaa 380
Query: 117 ggatcaaacaagcttgaaacatgtttagagagaaactcaatgctaggattctgctgaaga 176
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 ggatcaaacacgcttgaaacatgtttagagagaaactcaatgctaggattctgctgaaga 320
Query: 177 gtcttgttttatatgtctcaagcaaattaaaacccagcttgaaatttgttaaggaacagc 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 gtcttgttttatatgtctcaagcaaattaaaacccagcttgaaatttgttaaggaacagc 260
Query: 237 aaactacaaataatcttcatgcacattgtaaaagggactgagcagaatttctaaaatgt 295
||||||||||||||| || |||||||||||||||||| ||||||||||||||||||||
Sbjct: 259 aaactacaaataatcaccaggcacattgtaaaagggaccgagcagaatttctaaaatgt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 295
Length of database: 698
Length adjustment: 9
Effective length of query: 286
Effective length of database: 689
Effective search space: 197054
Effective search space used: 197054
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
