Query= MSMg01no264_n24.b1 MSMg01no264_n24.b1 CHROMAT_FILE:
MSMg01no264_n24.b1 PHD_FILE: MSMg01no264_n24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:02:11 2005
(316 letters)
>mm_chr11_25869122_25869837
Length = 716
Score = 536 bits (277), Expect = e-157
Identities = 304/313 (97%), Gaps = 2/313 (0%)
Strand = Plus / Minus
Query: 5 gaattcactgtagagaacatttttgtaaaatgaggggtggtaatagtagaagttccagcc 64
||||||||| |||||||||| | |||||||||||||||||||||||||||||| ||||||
Sbjct: 516 gaattcactatagagaacatctctgtaaaatgaggggtggtaatagtagaagtcccagcc 457
Query: 65 ttgtttccagtcttgcaagggaaatgatcagcaagcctatgaactattatacaggttgtg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 ttgtttccagtcttgcaagggaaatgatcagcaagcctatgaactattatacaggttgtg 397
Query: 125 aattttacttggtaaaatctcagggcgaaacagatgccatcatttttgtttgcttttaat 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 aattttacttggtaaaatctcagggcgaaacagatgccatcatttttgtttgcttttaat 337
Query: 185 aatggctcaatgttatattttgtatttttttta-acaccttgaatctattgcctttttgt 243
||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 336 aatggctcaatgttatattttgtcttttttttttacaccttgaatctattgcctttttgt 277
Query: 244 ttcattctgctcacttaatgcattttgctatttagttttcaaatattaaaaaaagcatta 303
|||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||
Sbjct: 276 ttcattctgctcacttaatgcattttgctaattagttttcaaatat-aaaaaaagcatta 218
Query: 304 gtattttcattat 316
|||||||||||||
Sbjct: 217 gtattttcattat 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 316
Length of database: 716
Length adjustment: 9
Effective length of query: 307
Effective length of database: 707
Effective search space: 217049
Effective search space used: 217049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no264_n24.g1 MSMg01no264_n24.g1 CHROMAT_FILE:
MSMg01no264_n24.g1 PHD_FILE: MSMg01no264_n24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:02:11 2005
(287 letters)
>mm_chr11_25721259_25721945
Length = 687
Score = 551 bits (285), Expect = e-161
Identities = 285/285 (100%)
Strand = Plus / Plus
Query: 1 acccttcagaaaacaacataattacagccattccagcaaaccgagtgccaaaaaagttac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acccttcagaaaacaacataattacagccattccagcaaaccgagtgccaaaaaagttac 260
Query: 61 aaattaattgaaggttagcattgaaaattaaatcttagtcagcttgaagtcatcttttag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaattaattgaaggttagcattgaaaattaaatcttagtcagcttgaagtcatcttttag 320
Query: 121 gctccttcctatagaattaagtagggaattcactccatatcagtttggttgacagagttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gctccttcctatagaattaagtagggaattcactccatatcagtttggttgacagagttc 380
Query: 181 caaagatcaggtggacaaatggccttctttccaactaccactttcctgggatctgatatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 caaagatcaggtggacaaatggccttctttccaactaccactttcctgggatctgatatt 440
Query: 241 gctaatttcaaggggcgcttgccaaagtagctcacaacacactgg 285
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gctaatttcaaggggcgcttgccaaagtagctcacaacacactgg 485
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 687
Length adjustment: 9
Effective length of query: 278
Effective length of database: 678
Effective search space: 188484
Effective search space used: 188484
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
