Query= MSMg01no265_j11.b1 MSMg01no265_j11.b1 CHROMAT_FILE:
MSMg01no265_j11.b1 PHD_FILE: MSMg01no265_j11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:03:07 2005
(325 letters)
>mm_chr11_106962944_106963668
Length = 725
Score = 603 bits (312), Expect = e-177
Identities = 315/316 (99%)
Strand = Plus / Plus
Query: 9 gaattcactatgtgttggcggaacaccatccaagaactaaactccaagaaaatgaaagga 68
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 gaattcactatgtgttggcggaacaccatccaagaactaaactccaagaaaatgaaagga 268
Query: 69 gtcttgtgacctcattttctccttggaatgtgctgctgtgccccttgccggtgtggcaga 128
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 269 gtcttgtgacctcattttctccttggaatgtgctgctgtgtcccttgccggtgtggcaga 328
Query: 129 cccgggtgagttgttacttgtttatttcctctgtggaagagcatgtttctgccatgtgca 188
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 cccgggtgagttgttacttgtttatttcctctgtggaagagcatgtttctgccatgtgca 388
Query: 189 cacagcccaccatgcaaggcttacccttgtaattggacactttactcatgtgacccttaa 248
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 cacagcccaccatgcaaggcttacccttgtaattggacactttactcatgtgacccttaa 448
Query: 249 acctcggagtacaaattgtctaatgctctggataaagcgggctttgtagtctgtgtcaat 308
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 acctcggagtacaaattgtctaatgctctggataaagcgggctttgtagtctgtgtcaat 508
Query: 309 tttagactccatgcat 324
||||||||||||||||
Sbjct: 509 tttagactccatgcat 524
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 325
Length of database: 725
Length adjustment: 9
Effective length of query: 316
Effective length of database: 716
Effective search space: 226256
Effective search space used: 226256
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no265_j11.g1 MSMg01no265_j11.g1 CHROMAT_FILE:
MSMg01no265_j11.g1 PHD_FILE: MSMg01no265_j11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:03:08 2005
(243 letters)
>mm_chr11_107124353_107124997
Length = 645
Score = 416 bits (215), Expect = e-121
Identities = 237/245 (96%), Gaps = 2/245 (0%)
Strand = Plus / Minus
Query: 1 catcctaagatctttaactaattactgtatgactgtactgaaagtccctgtgtgcaagta 60
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 445 catcctaagatctttaactaattactgtatgactgtactgaaagttcctgtgtgcaagta 386
Query: 61 aggtctttcccgagctttctgatagatgtgacttaaggagggagcctacagttcaggaag 120
||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 385 aggtctttcccgagcttcctgatagatgtgagttaaggagggagcctacagttcaggaag 326
Query: 121 cagactcctgtttttcaactttgtttggaaactggtgttcctgaaaaaacctgtccacag 180
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 325 cagactcctgtttttcaactttgtttggaaactggtgttcctgcaaaaacctgtccacag 266
Query: 181 acactttcagttcacaa--ctctctagaaatggatgaacatcgctcgtacgatgggaaac 238
||||||||||||||||| |||||| ||||||||||||||||||||| ||||||||||||
Sbjct: 265 acactttcagttcacaactctctcttgaaatggatgaacatcgctcgcacgatgggaaac 206
Query: 239 agttt 243
|||||
Sbjct: 205 agttt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 243
Length of database: 645
Length adjustment: 9
Effective length of query: 234
Effective length of database: 636
Effective search space: 148824
Effective search space used: 148824
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
