TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCCAGAAATCCGCGGAA
TTCATGGCCATTCCCATAAACATCGTGAGGAGTTCCAGACCAGCCAGGGC
TGCCAATGCGACCCTGTAGAGACCGGTTGGGGAGGAACTTCTGTGTCGAT
GTTTGGTTCACAATCATGCCCATTTGTTCAGTGTGTGTGCTTGCATCCGA
GCTATAATTGAATCAACCCATAGAGACCATAGAGCCGAGTATGTACAGTC
TAGCTCCTTACACCTTCACCAGTGCTCTACACGGTTGGGTGAGTATTTCT
GTTAGCTAAACCAGACCACTTTTTTATGAAAGGGCAGCCCCACTGGAGGA
GGACAAGAGATGATANTTTGACAGCCCCCGCCTCAATCAGAGAGCTATAA
CCCATGGAAGGAAGAACCACCCAGGAATACACCCTGAAGCTCAGGTGAAG
GGCACCGACGGCAGCGCTGAGGAGAGCTCTGGGCATGCAATTCCACAGAC
AGGCTGTCCTGAGTCAGAGATGCTGCCTGCCTGCCGGGAAAGGGGTCGAG
AACAGGAGTGGGCTTCCCTTCGAGTGGCTGCAGTTCACCGTGTCTGCCAG
CCTTGCAAAAGTTAACTGTGGGCTCAAGCTTCACAGTTTGGACACACGGT
CTTGATATCCTTTCCTCTCGGTCCTTCAAAGTCTACAAAGAAGGCAGCGT
TTCAGACATGAGCCCCTTTTGCTATTTGTGTGTGTGTGTGTGTGTGCGTN

CCATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXAATAACGGGGTTGTCTCCCCCTCTG
TGTGTGTGTGTTTTGCTGATGATCCCACAGTTCATGTAAGTCAAGCACAA
TATGACTTGAGCTATCCCCAGCCTTTTTAATTACTTGAGGCAGTCTCATA
TTGCCCAGGTTAATGTTCTGTGTAGCAAAGTATGACACCACACCATGGTT
CAGGACTCCATAGTTGATTTGGTGTTTGAGGAGAAAGAGTGGGTTTGGGT
TTGGTTTNNNNNNNNNNNNNTTTTTTTTTTNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNTTTTTNNNGTTTTCTTCCNNNCCCCNNCCCCCNNNNTNTTT
NNNNNNNNNNNNNNNNNNGGTTTCCCCCCCCAAAAAATTAAAAAAAAAAA
CGGGGGGGGGGGCGGGGGTCGCTCCCTTTTTTCTCTTTCTCTGCTTCCNT
CTCGTCGGGTGGGGGAGTGTCCTGGTTTTCTTCTCCACCTTCCGCTCCTT
NTCTGGCTTTATTTTTCTCTTTCTTTCCTTCTTACTTCCCTCTATCTCTT
TTTCCTTTCTTTTTTCTACCCTTTTTTCCCTTCTCCTACTCCTCCTTATT
CCCCCTTTCCTTTATTTTAACAACCACCCACACCCCTGAAACTGTTATCC
TTCTCCCTTCTTTTTTACCTATCTCTTCTTACTTTCACATATTCTATTTC
CTATAATCACACACCCTATTCATATTTATTTCCAACTCTCC

Query= MSMg01no266_p15.b1 MSMg01no266_p15.b1 CHROMAT_FILE:
MSMg01no266_p15.b1 PHD_FILE: MSMg01no266_p15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:04:54 2005
         (302 letters)



>mm_chr11_62520744_62521445
          Length = 702

 Score =  576 bits (298), Expect = e-169
 Identities = 301/302 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   ctgaagctcaggtgaagggcaccgacggcagcgctgaggagagctctgggcatgcaattc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 ctgaagctcaggtgaagggcaccgacggcagcgctgaggagagctctgggcatgcaattc 443

                                                                       
Query: 61  cacagacaggctgtcctgagtcagagatgctgcctgcctgccgggaaaggggtcgagaac 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 cacagacaggctgtcctgagtcagagatgctgcctgcctgccgggaaaggggtcgagaac 383

                                                                       
Query: 121 aggagtgggcttcccttcgagtggctgcagttcaccgtgtctgccagccttgcaaaagtt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 aggagtgggcttcccttcgagtggctgcagttcaccgtgtctgccagccttgcaaaagtt 323

                                                                       
Query: 181 aactgtgggctcaagcttcacagtttggacacacggtcttgatatcctttcctctcggtc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 aactgtgggctcaagcttcacagtttggacacacggtcttgatatcctttcctctcggtc 263

                                                                       
Query: 241 cttcaaagtctacaaagaaggcagcgtttcagacatgagccccttttgctatttgtgtgt 300
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 cttcaaagtctacaaggaaggcagcgtttcagacatgagccccttttgctatttgtgtgt 203

             
Query: 301 gt 302
           ||
Sbjct: 202 gt 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 302
Length of database: 702
Length adjustment: 9
Effective length of query: 293
Effective length of database: 693
Effective search space:   203049
Effective search space used:   203049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no266_p15.g1 MSMg01no266_p15.g1 CHROMAT_FILE:
MSMg01no266_p15.g1 PHD_FILE: MSMg01no266_p15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:04:55 2005
         (179 letters)



>mm_chr11_62368926_62369504
          Length = 579

 Score =  346 bits (179), Expect = e-100
 Identities = 179/179 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   agttcatgtaagtcaagcacaatatgacttgagctatccccagcctttttaattacttga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agttcatgtaagtcaagcacaatatgacttgagctatccccagcctttttaattacttga 260

                                                                       
Query: 61  ggcagtctcatattgcccaggttaatgttctgtgtagcaaagtatgacaccacaccatgg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggcagtctcatattgcccaggttaatgttctgtgtagcaaagtatgacaccacaccatgg 320

                                                                      
Query: 121 ttcaggactccatagttgatttggtgtttgaggagaaagagtgggtttgggtttggttt 179
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttcaggactccatagttgatttggtgtttgaggagaaagagtgggtttgggtttggttt 379


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 179
Length of database: 579
Length adjustment: 8
Effective length of query: 171
Effective length of database: 571
Effective search space:    97641
Effective search space used:    97641
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)