Query= MSMg01no267_b14.b1 MSMg01no267_b14.b1 CHROMAT_FILE:
MSMg01no267_b14.b1 PHD_FILE: MSMg01no267_b14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:05:04 2005
(317 letters)
>mm_chr11_78946145_78946861
Length = 717
Score = 565 bits (292), Expect = e-165
Identities = 307/312 (98%)
Strand = Plus / Minus
Query: 5 gaattcaattcatatccttcacataatcccatgaatggaattcttaggttaaaatgagtc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 gaattcaattcatatccttcacataatcccatgaatggaattcttaggttaaaatgagtc 457
Query: 65 aggagtgcctacctgtctgcctctggctgtctctgccgtgtgctccccactactcccttt 124
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 456 aggagtgcctacctgtctgcctctggctgtctctgccatgtgctccccactactcccttt 397
Query: 125 acatgaaagtttcccaccatccaagatggtcttaaactgttaatccttttgcctccatct 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 acatgaaagtttcccaccatccaagatggtcttaaactgttaatccttttgcctccatct 337
Query: 185 cctaagttctgggagttcagggtgtgtacctactcccagtttccccatctatttatctgt 244
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 336 cctaagttctgggagttcagggtgtgtacctactcccagtttccccatgtatttatctgt 277
Query: 245 gcatttcttcctaacctctctattaaaattttttttttcttgttaaatcatttttcattt 304
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 276 gcatttcttcctaacctctctattaaaatttttttggccttgttaaatcatttttcattt 217
Query: 305 gctctttatttc 316
||||||||||||
Sbjct: 216 gctctttatttc 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 317
Length of database: 717
Length adjustment: 9
Effective length of query: 308
Effective length of database: 708
Effective search space: 218064
Effective search space used: 218064
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no267_b14.g1 MSMg01no267_b14.g1 CHROMAT_FILE:
MSMg01no267_b14.g1 PHD_FILE: MSMg01no267_b14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:05:04 2005
(641 letters)
>mm_chr11_78790416_78791456
Length = 1041
Score = 1135 bits (587), Expect = 0.0
Identities = 629/643 (97%), Gaps = 4/643 (0%)
Strand = Plus / Plus
Query: 1 aagacctttcctcttaagagagggtagagaggaaggtatccccctaacccc-accaccat 59
|||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||
Sbjct: 201 aagacctttcctcttaagagagggtagagaggaaggtatccccc-aacccccaccaccat 259
Query: 60 gtaacaacaatggcagcttgttacatgctcggttgttacatgctgtgttgttacatgctc 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 gtaacaacaatggcagcttgttacatgctcggttgttacatgctgtgttgttacatgctc 319
Query: 120 gctcagttctcctgggccagctctgctgctggttgttagcggcagcctgctctgaagatc 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 gctcagttctcctgggccagctctgctgctggttgttagcggcagcctgctctgaagatc 379
Query: 180 tcagcttctgatccttccctaggccaccccagctgcctgtgagcccagtggtccctccac 239
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 380 tcagcttctgatccttccctaggccgccccagctgcctgtgagcccagtggtccctccac 439
Query: 240 cccagggcccgccagcactctctccatcaggtttctccctaccctccctattgtgctcta 299
|||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||
Sbjct: 440 cccagggcccgccagcactctctccatcaggtttctccctaccctccctaaagtgcccta 499
Query: 300 aa-ggcgcactgggtctcagtgagagtcatgctgctttagagtcagaacagttccacgtt 358
|| || |||||||||| ||||||||||||||||||||||||||||||| ||||||| |||
Sbjct: 500 aatgg-gcactgggtcccagtgagagtcatgctgctttagagtcagaagagttccaggtt 558
Query: 359 tggaccctagtcactgatcagtatctgtgtggcctttgaaaacttagtctctctttgcct 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 tggaccctagtcactgatcagtatctgtgtggcctttgaaaacttagtctctctttgcct 618
Query: 419 cagtttcttcatttgtaaatggagataaactatctcccctgctccgggactcagttcctt 478
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 cagtttcttcatttgcaaatggagataaactatctcccctgctccgggactcagttcctt 678
Query: 479 cacaagactggcacccctctgccctcattcttcttgcctcatcctctcaaaaccaaattc 538
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 cacaagactgccacccctctgccctcattcttcttgcctcatcctctcaaaaccaaattc 738
Query: 539 ccaaattggtgacttaccatcttccagaatatccttttctaccaaggatagctctgctgc 598
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 ccaaattggcgacttaccatcttccagaatatccttttctaccaaggatagctctgctgc 798
Query: 599 ctcccggggctgtctcctgattgattctgctctctctccaggg 641
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 799 ctcccggggctgtctcctgattgattctgctctctctccaggg 841
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 641
Length of database: 1041
Length adjustment: 10
Effective length of query: 631
Effective length of database: 1031
Effective search space: 650561
Effective search space used: 650561
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
