Query= MSMg01no268_f20.b1 MSMg01no268_f20.b1 CHROMAT_FILE:
MSMg01no268_f20.b1 PHD_FILE: MSMg01no268_f20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:06:38 2005
(323 letters)
>mm_chr11_53565111_53565833
Length = 723
Score = 482 bits (249), Expect = e-140
Identities = 291/319 (91%), Gaps = 22/319 (6%)
Strand = Plus / Minus
Query: 5 gaattctggctgctcttgcaaaggactgaagttcaagtcccagtacccataactccatct 64
||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||
Sbjct: 648 gaattctggctgctcttgcaaaggactgaagttcaagtcccagcacccgtaactccatct 589
Query: 65 tcaggggatctgaagctcttttctggcctcctttggaacctgcacttacatgcacacaca 124
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 588 tcaggggatctgaagctcttttctggcctcctttggaacctgcacttacatg-------- 537
Query: 125 cacacacacacacacacacacacacacgtaaaaataaaccttttttaaaacacagtttaa 184
||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 536 --------------cacacacacacacgtaaaaataaacctttttaaaaacacagtttaa 491
Query: 185 ttaaaaataataacaaaaacaaaaatgacacaaagacttagaaaggataccatgtgcagg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 ttaaaaataataacaaaaacaaaaatgacacaaagacttagaaaggataccatgtgcagg 431
Query: 245 agggaatcagtgcagtgtgctttctctttctcttttaatatttgtttttattacttttaa 304
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 agggaatcagcacagtgtgctttctctttctcttttaatatttgtttttattacttttaa 371
Query: 305 ttatgtatgtgtgtatatc 323
|||||||||||| ||||||
Sbjct: 370 ttatgtatgtgtatatatc 352
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 323
Length of database: 723
Length adjustment: 9
Effective length of query: 314
Effective length of database: 714
Effective search space: 224196
Effective search space used: 224196
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no268_f20.g1 MSMg01no268_f20.g1 CHROMAT_FILE:
MSMg01no268_f20.g1 PHD_FILE: MSMg01no268_f20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:06:38 2005
(293 letters)
>mm_chr11_53390953_53391645
Length = 693
Score = 476 bits (246), Expect = e-139
Identities = 278/292 (95%), Gaps = 9/292 (3%)
Strand = Plus / Plus
Query: 6 ctctcttcttccttctctgccaccc-ctgcctggtttatgttcgtacttctgtctcgatt 64
||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||
Sbjct: 206 ctctcttcttccttctctgccacccgctacctggtttatgttcgtacttctgtctcgatt 265
Query: 65 tgtttctccaccataagaccagggtttgtattcgccctatttgtcactttgaccttggtg 124
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||
Sbjct: 266 tgtttctccaccataagaccagggtttgtattcgccctatttgtcactttgtccttgatg 325
Query: 125 cctggtcccgtgtcatgcttaggtatgtgtggggagtacttgttaaatgggtaggtacat 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 cctggtcccgtgtcatgcttaggtatgtgtggggagtacttgttaaatgggtaggtacat 385
Query: 185 ttcagaagtatgagtcataaccagttgcctatagtaatgatcacttttctagttaatagt 244
|| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 386 ttaagaagtatgagtcataaccagttgcctatagtaatgat-acttttctagttaatagt 444
Query: 245 attttacaactgct----taaa---tttcttttaaaatagtgaattatttta 289
|||||||||||||| || | |||||||||||||||||||||||||||
Sbjct: 445 attttacaactgctactttagaccgtttcttttaaaatagtgaattatttta 496
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 293
Length of database: 693
Length adjustment: 9
Effective length of query: 284
Effective length of database: 684
Effective search space: 194256
Effective search space used: 194256
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
