Query= MSMg01no270_g20.b1 MSMg01no270_g20.b1 CHROMAT_FILE:
MSMg01no270_g20.b1 PHD_FILE: MSMg01no270_g20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:09:04 2005
(323 letters)
>mm_chr11_85957522_85958245
Length = 724
Score = 590 bits (305), Expect = e-173
Identities = 314/317 (99%), Gaps = 1/317 (0%)
Strand = Plus / Plus
Query: 5 gaattcctca-catacaaatctttccatgaggaaaagtaaggatatggttagtgatgaga 63
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 205 gaattcctcaacatacaaatctttccatgaggaaaagtaaggatatggttagtgatgaaa 264
Query: 64 gtttaggttaatcggggtatctagcaagttcaaggccagactataatacataagacctta 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gtttaggttaatcggggtatctagcaagttcaaggccagactataatacataagacctta 324
Query: 124 tctacaaaactgaaaacaaaaacatatacaatactattaagtcttaagaaaaaagaaaag 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tctacaaaactgaaaacaaaaacatatacaatactattaagtcttaagaaaaaagaaaag 384
Query: 184 aaaagaaacaaggctggaggaggacccaggtttagtttccagcactcatgtggcagctca 243
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 385 aaaagaaacaaggctggaggagaacccaggtttagtttccagcactcatgtggcagctca 444
Query: 244 caactgtctgtaactcgtttcagggggatccgaagccttcttcttgcctccatgggtaca 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 caactgtctgtaactcgtttcagggggatccgaagccttcttcttgcctccatgggtaca 504
Query: 304 cacacacacacacacac 320
|||||||||||||||||
Sbjct: 505 cacacacacacacacac 521
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 323
Length of database: 724
Length adjustment: 9
Effective length of query: 314
Effective length of database: 715
Effective search space: 224510
Effective search space used: 224510
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no270_g20.g1 MSMg01no270_g20.g1 CHROMAT_FILE:
MSMg01no270_g20.g1 PHD_FILE: MSMg01no270_g20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:09:04 2005
(288 letters)
>mm_chr11_86125082_86125768
Length = 687
Score = 542 bits (280), Expect = e-158
Identities = 286/288 (99%), Gaps = 1/288 (0%)
Strand = Plus / Minus
Query: 1 tgtttgctattttaatgcaataaaattatacttttgacagctcaaggaatatttctgaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 tgtttgctattttaatgcaataaaattatacttttgacagctcaaggaatatttctgaat 428
Query: 61 atggagatagtacgagggctagtaccatttaaagaaagtgggaggattttgagctattca 120
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 atggagatggtacgagggctagtaccatttaaagaaagtgggaggattttgagctattca 368
Query: 121 gttcttctgtttttaacatttcctccttagtttatctcctataattgttaatgcatattg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 gttcttctgtttttaacatttcctccttagtttatctcctataattgttaatgcatattg 308
Query: 181 tcaaaccttttctggaagaattcttttgaataaacacttaaaagttttatgtgagtacat 240
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 307 tcaaaccttttctggaagaattcttttgaataaacacttaaa-gttttatgtgagtacat 249
Query: 241 atcaagagagtgtgctgttatcttagtgagaggaaggagatgcaatta 288
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 atcaagagagtgtgctgttatcttagtgagaggaaggagatgcaatta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 687
Length adjustment: 9
Effective length of query: 279
Effective length of database: 678
Effective search space: 189162
Effective search space used: 189162
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
