TATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCTGCTAGGAATAATGGTGACCTTGGCTATAACTTCTAGTGTTCACATT
CCTGGAACATTTGTCTAATGCTCCTTGTCTGACTCTGGCCCCACTTGCCG
TAACATCTCAGCGGCTGCTCAGTGCTGTGTATCTGTTCTGGGATGGCTGT
GGGGTGGGGAAGCTAATTGCTTTCATACTGCAGCCTCCACGGTTCTTTGG
TTTTCCTTTTATAATGTAATTTCTTCCATTTCCAGTTTGTAGGCAAGACG
CAGAACCTCTCTCTTAATGGAGGAAATAATGGAGTAGATGCACTAAGAAA
GTTTCCAGTAATTTCTGTTAAGTGAATTCTGAAGTGAACTCTTAAGACAA
CAACAACAACAACAGAAAACAGTGGCTCTGCCTCTCCCAAAGCCTGCTGT
GTACCTCAAACCAGTGAAATGCATTTACTCTACATTCATGTTATCAGTGC
TGGAAGATCTCTCCATCAGTCAAAATCAAGAAAACAAAATACAAGTATTA
ATATATGGTCCATCTGGTTGCTTCTTTAACGGTTTTAAAAAATGGATAGT
CTGTAACATGGACTGACACCAATGTCTCAACCCTGTATCAGGTGGGATAG
AGCCTGCAGAAGTTGAAATGCATGTCTAGCCACATGTGTGAGTTATAAAG
ACAGCACAGAAGCCCCAGTGAGTAGCCTGTCTGTTTCTCATGA

CXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXCAGAGCTGGACATTGAAAATCATTTGTACT
GTTGGAGTTTAGTTTTGCTTTGTTAACATGTGACTGGGCTCTGGTTCTCC
CCTCTTGAAATAAGAAAGCACTTAATTGATTTTTGATTTGACAGGAGCCC
AACAGTTGAGAAACTTTGAATCTTAAAAGACTTTGGATTTTTAAAGAGAC
AGCCTATTTTAAAGAAACTGAATTTTAAATCTTTGAATGTTTAATGACTG
GGAGCTTTTAAAAATCGGGATGTTTATATTGTAAGGTTGATATTTATATG
TGATCTTGGGAGATGTACAAGAAAGGCAGGATTATGACTTAACAGTGATG
TGTTTGTGTCAAGGTGACAAAGGGACAATTGTATTGGCTAGTTTTATGTC
ACCTCAACACAGACTAGAGTTATCTGAAAGAAGGGAATCTCAAATGAGAA
AACGTCGCCATAAATTCTAGCTGCAGGGCATTTTCTTAATTAATTATTGA
TGTGGGAGGGCCCAGCCCATTGTAGGTGGTGTCATCCCTGAGCTGGTGGC
CCTGAGTTCTATAAGAAAGCACTCTGGAGGAGCAAGCCAGCAAGCAGTAC
TCCTCCGTGGCCTCATAATCAACTCCTGCCTCCAGTTTCCTGCCCTGGTT
TGAGTTCCTGTACTGACTTCTTTCCGTCATGATCA

Query= MSMg01no271_j06.b1 MSMg01no271_j06.b1 CHROMAT_FILE:
MSMg01no271_j06.b1 PHD_FILE: MSMg01no271_j06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:10:29 2005
         (682 letters)



>mm_chr11_20911038_20912120
          Length = 1083

 Score =  996 bits (515), Expect = 0.0
 Identities = 541/557 (97%), Gaps = 13/557 (2%)
 Strand = Plus / Minus

                                                                        
Query: 127  cagtgctgtgtatctgttctgggatggctgtggggtggggaagctaattgctttcatact 186
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1083 cagtgctgtgtatctgttctgggatggctgtggggtggggaagctaattgctttcatact 1024

                                                                        
Query: 187  gcagcctccacggttctttggttttccttttataatgtaatttcttccatttccagtttg 246
            ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1023 gcagccttcactgttctttggttttccttttataatgtaatttcttccatttccagtttg 964

                                                                        
Query: 247  taggcaagacgcagaacctctctcttaatggaggaaataatggagtagatgcactaagaa 306
            || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 963  taagcaagacgcagaacctctctcttaatggaggaaataatggagtagatgcactaagaa 904

                                                                        
Query: 307  agtttccagtaatttctgttaagtgaattctgaagtgaactcttaaga-caacaacaaca 365
            ||||||||||||||||||||            |||||||||||||||| |||||||||||
Sbjct: 903  agtttccagtaatttctgtt------------aagtgaactcttaagaccaacaacaaca 856

                                                                        
Query: 366  acaacagaaaacagtggctctgcctctcccaaagcctgctgtgtacctcaaaccagtgaa 425
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 855  acaacagaaaacagtggctctgcctctcccaaagcctgctgtgtacctcaaaccagtgaa 796

                                                                        
Query: 426  atgcatttactctacattcatgttatcagtgctggaagatctctccatcagtcaaaatca 485
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 795  atgcatttactctacattcatgttatcagtgctggaagatctctccatcagtcaaaatca 736

                                                                        
Query: 486  agaaaacaaaatacaagtattaatatatggtccatctggttgcttctttaacggttttaa 545
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 735  agaaaacaaaatacaagtattaatatatggtccatctggttgcttctttaacggttttaa 676

                                                                        
Query: 546  aaaatggatagtctgtaacatggactgacaccaatgtctcaaccctgtatcaggtgggat 605
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675  aaaatggatagtctgtaacatggactgacaccaatgtctcaaccctgtatcaggtgggat 616

                                                                        
Query: 606  agagcctgcagaagttgaaatgcatgtctagccacatgtgtgagttataaagacagcaca 665
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615  agagcctgcagaagttgaaatgcatgtctagccacatgtgtgagttataaagacagcaca 556

                             
Query: 666  gaagccccagtgagtag 682
            |||||||||||||||||
Sbjct: 555  gaagccccagtgagtag 539


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 682
Length of database: 1083
Length adjustment: 10
Effective length of query: 672
Effective length of database: 1073
Effective search space:   721056
Effective search space used:   721056
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)