Query= MSMg01no271_o09.b1 MSMg01no271_o09.b1 CHROMAT_FILE:
MSMg01no271_o09.b1 PHD_FILE: MSMg01no271_o09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:10:53 2005
(349 letters)
>mm_chr11_63128610_63129351
Length = 742
Score = 545 bits (282), Expect = e-159
Identities = 332/352 (94%), Gaps = 10/352 (2%)
Strand = Plus / Minus
Query: 1 aatggagtacacacagagaagagtctctttgcaagatccagagagacctggagccaaagc 60
||||||||||||||||||||||| | ||||||||||||||| ||||||||||||||
Sbjct: 479 aatggagtacacacagagaagagcccctttgcaagatccag-----cctggagccaaagc 425
Query: 61 cctgatcttgtggatttctaaagaatcctgctaagaccaggataaactttcactcaccaa 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 424 cctgatcttgtggatttctaaagaatcctgctaagaccaggataaactttcactcatcaa 365
Query: 121 cagaatgagccaaagaaatttctgtttttaaaacaagattgaacagggatttatggtctt 180
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 364 cagaatgagccaaagaaatttctgtttttaaaacatgattgaacagggatttatggtctt 305
Query: 181 tagttgaaagagcataaagtcattcatagagatataactaagaacaatgctgtgtccacc 240
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 304 tagttgaaagagcataaagtcattcatagagatataactaagaacaatgc--tgtccacc 247
Query: 241 cgtattgtccagcttcaagggcaatgttcacattgacttggatctcctctctctctctc- 299
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 cgtcttgtccagcttcaagggcaatgttcacattgacttggatctcctctctctctctct 187
Query: 300 ccccctctctct-tctctctctct-tctctctctctctttctgtctccctct 349
| | |||||||| ||||||||||| ||||||||||||| ||| |||| ||||
Sbjct: 186 ctctctctctctctctctctctctctctctctctctctctctctctctctct 135
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 50
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 349
Length of database: 742
Length adjustment: 9
Effective length of query: 340
Effective length of database: 733
Effective search space: 249220
Effective search space used: 249220
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no271_o09.g1 MSMg01no271_o09.g1 CHROMAT_FILE:
MSMg01no271_o09.g1 PHD_FILE: MSMg01no271_o09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:10:53 2005
(284 letters)
>mm_chr11_63029597_63030280
Length = 684
Score = 526 bits (272), Expect = e-154
Identities = 281/284 (98%)
Strand = Plus / Plus
Query: 1 caaatgtcatcaaattacttaggaaagttcttcatgtgtgcattcgtgcgtgtctgtgtg 60
||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||
Sbjct: 201 caaatgtcatcaaattacttaggaaagttcttcatgtgtgcatgcgtgtgtgtctgtgtg 260
Query: 61 tgtgcacatgtgtgtccaggaagtctgtggatccttcccatgtgttttctgatgacttga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgtgcacatgtgtgtccaggaagtctgtggatccttcccatgtgttttctgatgacttga 320
Query: 121 gaatgggaaccatattctgacaacagttcttcttccaccaacaagtaaatctgcggcatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gaatgggaaccatattctgacaacagttcttcttccaccaacaagtaaatctgcggcatt 380
Query: 181 aacaggagagattgtcccatgaagaagacaagggttctcatttggaatccattaaaaaat 240
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aacaggagagattgtcccataaagaagacaagggttctcatttggaatccattaaaaaat 440
Query: 241 accttagctcaagagtattgttgctaatgtctctccttttgttg 284
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 accttagctcaagagtattgttgctaatgtctctccttttgttg 484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 284
Length of database: 684
Length adjustment: 9
Effective length of query: 275
Effective length of database: 675
Effective search space: 185625
Effective search space used: 185625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
