Query= MSMg01no272_m12.b1 MSMg01no272_m12.b1 CHROMAT_FILE:
MSMg01no272_m12.b1 PHD_FILE: MSMg01no272_m12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:12:01 2005
(313 letters)
>mm_chr11_112058670_112059382
Length = 713
Score = 582 bits (301), Expect = e-171
Identities = 307/309 (99%)
Strand = Plus / Plus
Query: 5 gaattcactgattatcgtagagttttcagtaaaagagacaatggagaataggagtgagtc 64
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcactgaatatcgtagagttttcagtaaaagagacaatggagaataggagtgagtc 264
Query: 65 cccgccccacccccttagtacccatctctcagccagagcaagtttgaagaacaaaaggaa 124
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 265 cccgccccacccccttagtacccatctctcagccagagcaagtgtgaagaacaaaaggaa 324
Query: 125 attctattaaagcagttccctccgcctgcgcttcacaggcataagtagttccttggtgtg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 attctattaaagcagttccctccgcctgcgcttcacaggcataagtagttccttggtgtg 384
Query: 185 ctcctttggcctgtggtacaattaattaggccacagttgtttattttgagacagttaact 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ctcctttggcctgtggtacaattaattaggccacagttgtttattttgagacagttaact 444
Query: 245 agagaccttcttgagagagaggcctgctccggtcgtcattcttgctttcctctaagtgtg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 agagaccttcttgagagagaggcctgctccggtcgtcattcttgctttcctctaagtgtg 504
Query: 305 ggaaccttt 313
|||||||||
Sbjct: 505 ggaaccttt 513
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 313
Length of database: 713
Length adjustment: 9
Effective length of query: 304
Effective length of database: 704
Effective search space: 214016
Effective search space used: 214016
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no272_m12.g1 MSMg01no272_m12.g1 CHROMAT_FILE:
MSMg01no272_m12.g1 PHD_FILE: MSMg01no272_m12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:12:01 2005
(282 letters)
>mm_chr11_112181048_112181730
Length = 683
Score = 528 bits (273), Expect = e-154
Identities = 279/281 (99%), Gaps = 1/281 (0%)
Strand = Plus / Minus
Query: 1 acagcagacacagaagctgctgttcaacattctgaggtggagataaactattttactcta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 acagcagacacagaagctgctgttcaacattctgaggtggagataaactattttactcta 422
Query: 61 attatcctcctgtcccacaagacaaagtcccaattcctt-actttcccttgaaggagaag 119
|||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 421 attatcctcctgccccacaagacaaagtcccaattccttcactttcccttgaaggagaag 362
Query: 120 tcacattagggagcagttctttggaggatgggatgccacaaaaggagaaataccaggagc 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tcacattagggagcagttctttggaggatgggatgccacaaaaggagaaataccaggagc 302
Query: 180 catttgcccagaaggcttcagaagtgcatgcgacaaatatgggtgaagaaggaatcatga 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 catttgcccagaaggcttcagaagtgcatgcgacaaatatgggtgaagaaggaatcatga 242
Query: 240 tggttttcaagtcctatgataattaacgaccattgccctcg 280
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tggttttcaagtcctatgataattaacgaccattgccctcg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 282
Length of database: 683
Length adjustment: 9
Effective length of query: 273
Effective length of database: 674
Effective search space: 184002
Effective search space used: 184002
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
