Query= MSMg01no273_c05.b1 MSMg01no273_c05.b1 CHROMAT_FILE:
MSMg01no273_c05.b1 PHD_FILE: MSMg01no273_c05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:12:27 2005
(300 letters)
>mm_chr11_7102358_7103058
Length = 701
Score = 516 bits (267), Expect = e-151
Identities = 291/299 (97%), Gaps = 1/299 (0%)
Strand = Plus / Plus
Query: 1 ttatctttgtt-cctctgtctgtttgtcttccccatcacctgacttctggtctgtgctta 59
||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttatctttgttccctctgtccgtttgtcttccccatcacctgacttctggtctgtgcttt 260
Query: 60 ggggaaagatggtgcttgtttgcttacagaagatcttgtctgacactctgtgattccatg 119
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggggaaagatggtgcttgtttgcttacagaagatcttgtctgacactctgtgattccata 320
Query: 120 gccccattcccaagcagtattaggcctctgcctgggccagactagagatccctgccacct 179
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 321 gccccattcccaagcagtattaggcctctgcctgggccagactagagatccccaccacct 380
Query: 180 tggcccatctcccttgcttcccaggacccccagcctctcctttccttaccactcttcagc 239
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 381 tggcccatctcccttgcttcccaggacccccagcctctcctttccttaccactcctcagc 440
Query: 240 tccagctgatgtccacgtgtattccggggagcagtcactgggttgtttgcttttgagac 298
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tccagctgatgtccgcgtgtattccggggagcagtcactgggttgtttgcttttgagac 499
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 300
Length of database: 701
Length adjustment: 9
Effective length of query: 291
Effective length of database: 692
Effective search space: 201372
Effective search space used: 201372
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no273_c05.g1 MSMg01no273_c05.g1 CHROMAT_FILE:
MSMg01no273_c05.g1 PHD_FILE: MSMg01no273_c05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:12:27 2005
(287 letters)
>mm_chr11_7239957_7240643
Length = 687
Score = 555 bits (287), Expect = e-162
Identities = 287/287 (100%)
Strand = Plus / Minus
Query: 1 actcttcttggggcaaccagatcatggagtacagaacttattatttgattatatagcagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 actcttcttggggcaaccagatcatggagtacagaacttattatttgattatatagcagc 284
Query: 61 actagaccaacccaaatgcttatgtcaacagaatatgtttacttggaacttcattcaccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 actagaccaacccaaatgcttatgtcaacagaatatgtttacttggaacttcattcaccc 224
Query: 121 aaggtttagtctacttcctagaaagaacaggttttcaaaatatttctttatgctattctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223 aaggtttagtctacttcctagaaagaacaggttttcaaaatatttctttatgctattctg 164
Query: 181 gatttctttggagtctatattaatgttccctgctcatttctgattctgttaatctgtgtc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 163 gatttctttggagtctatattaatgttccctgctcatttctgattctgttaatctgtgtc 104
Query: 241 tttttttctcttttgtttatgtgtgccaatagtctatggatcttatg 287
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103 tttttttctcttttgtttatgtgtgccaatagtctatggatcttatg 57
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 687
Length adjustment: 9
Effective length of query: 278
Effective length of database: 678
Effective search space: 188484
Effective search space used: 188484
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
