Query= MSMg01no275_d06.b1 MSMg01no275_d06.b1 CHROMAT_FILE:
MSMg01no275_d06.b1 PHD_FILE: MSMg01no275_d06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:14:54 2005
(286 letters)
>mm_chr11_78790108_78790793
Length = 686
Score = 470 bits (243), Expect = e-137
Identities = 275/287 (95%), Gaps = 6/287 (2%)
Strand = Plus / Minus
Query: 1 cttctggcctcctgagtccctagtcaggaccctgaggtctttgttgaa-tctgggttgag 59
||||||||||||||||||||||||||||||||||||||||||| |||| | |||||||||
Sbjct: 484 cttctggcctcctgagtccctagtcaggaccctgaggtctttggtgaact-tgggttgag 426
Query: 60 gccagcagccttcaccacaattctcattcctaaccttgtatgctgtttccttctggtagg 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 gccagcagccttcaccacaattctcattcctaaccttgtatgctgtttccttctggtagg 366
Query: 120 ttctacagctgtcacctcctacagactggggaagataaaggcttgaggtcacttgctggc 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 ttctacagctgtcacctcctacagactggggaagataaaggcttgaggtcacttgctggc 306
Query: 180 caagcctcagaaacctggtggtcttctgatcatttcagaaggaccatgaaactagattgg 239
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 305 caagcctcagaaacctggtggtcttctgatcatttcagaaggaccgtgaaactagattgg 246
Query: 240 gcctgtttctattagggaccccct--gttctgtgtggctgggattct 284
||||| |||| |||||||| | |||||||||||||||||||||
Sbjct: 245 gcctgcctctacgagggaccc--taagttctgtgtggctgggattct 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 286
Length of database: 686
Length adjustment: 9
Effective length of query: 277
Effective length of database: 677
Effective search space: 187529
Effective search space used: 187529
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no275_d06.g1 MSMg01no275_d06.g1 CHROMAT_FILE:
MSMg01no275_d06.g1 PHD_FILE: MSMg01no275_d06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:14:54 2005
(277 letters)
>mm_chr11_78642916_78643592
Length = 677
Score = 513 bits (265), Expect = e-150
Identities = 274/277 (98%)
Strand = Plus / Plus
Query: 1 tcaggtcacaggagttgacagggtcattgttcatggcactggtctgagcacaatcagtct 60
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 201 tcaggtcacaggagttgacagggtcattgttcatggcactggtccgagcacaatcagtct 260
Query: 61 gctgtctctcacactcttggtgtgcttgagagtcgggggaggaagctcagggatgaggga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gctgtctctcacactcttggtgtgcttgagagtcgggggaggaagctcagggatgaggga 320
Query: 121 gagtggggaggatgagaagcacagagtagggcagggtggggtggggaagatggtaatcac 180
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gagtagggaggatgagaagcacagagtagggcagggtggggtggggaagatggtaatcac 380
Query: 181 tcctatgctggaaaggggatgacagagggtctgagggagtcagtcggctttgtgcgatgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcctatgctggaaaggggatgacagagggtctgagggagtcagtcggctttgtgcgatgg 440
Query: 241 acttgctggtgatcaggacagaactcacactcttcac 277
||||||||||||||||||||||||||| |||||||||
Sbjct: 441 acttgctggtgatcaggacagaactcagactcttcac 477
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 277
Length of database: 677
Length adjustment: 9
Effective length of query: 268
Effective length of database: 668
Effective search space: 179024
Effective search space used: 179024
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
