Query= MSMg01no275_n19.b1 MSMg01no275_n19.b1 CHROMAT_FILE:
MSMg01no275_n19.b1 PHD_FILE: MSMg01no275_n19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:15:40 2005
(677 letters)
>mm_chr11_44856439_44857517
Length = 1079
Score = 845 bits (437), Expect = 0.0
Identities = 476/489 (97%), Gaps = 4/489 (0%)
Strand = Plus / Minus
Query: 5 gaattcttgatc-tcaattgtttaccatcattactgccaaagggggcatggaataaccaa 63
|||||||||| | | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 gaattcttgaacataaattgtttaccatcattactgccaaagggggcatggaataaccag 429
Query: 64 gtaagcagta-cgctgactaccgtgcctcaagggaatttttaactaagaactttggagtg 122
|||||||||| | ||||||||| |||||||||||||||||||||||||| ||||||||||
Sbjct: 428 gtaagcagtagc-ctgactaccatgcctcaagggaatttttaactaagagctttggagtg 370
Query: 123 ttcgggaatgtctaggaggtaagaaag-tggtgtatcagtagaacttggactgtgttcaa 181
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 369 ttcgggaatgtctaggaggtaagaaagctggtgtatcagtagaacttggactgtgttcaa 310
Query: 182 gaaagatctaaataggaccttcgttccattaattttttgactaagaatgtgtttgtgttt 241
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 309 gaaagatctaaataggaccttcgttccattaactttttgactaagaatgtgtttgtgttt 250
Query: 242 tgtgaagtttcatctatactttctgtgagtgttctttaaaatacttgtttatgagtgctt 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 tgtgaagtttcatctatactttctgtgagtgttctttaaaatacttgtttatgagtgctt 190
Query: 302 ggatgcatatatgtgggtgctgtgcaagagcccacggagttcagtagagtttgtggattc 361
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 189 ggatgcatatatgtgggtgctgtgcaagagcccatggagttcagtagagtttgtggattc 130
Query: 362 tcttgaactggggttactgatggttgtaggcagccatgtaggagctaggaaccaaacttg 421
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 129 tcttgaactggggttactgatggttgtaggcagccatgtaggagctaggaaccgaacttg 70
Query: 422 ggcctttgaaaacagcttcaagtgcttttaatccatctctccagctccaaacctatgtta 481
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69 ggcctttgaaaacagcatcaagtgcttttaatccatctctccagctccaaacctatgtta 10
Query: 482 atatatctt 490
|||||||||
Sbjct: 9 atatatctt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 677
Length of database: 1079
Length adjustment: 10
Effective length of query: 667
Effective length of database: 1069
Effective search space: 713023
Effective search space used: 713023
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no275_n19.g1 MSMg01no275_n19.g1 CHROMAT_FILE:
MSMg01no275_n19.g1 PHD_FILE: MSMg01no275_n19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:15:40 2005
(230 letters)
>mm_chr11_44702420_44703048
Length = 629
Score = 391 bits (202), Expect = e-113
Identities = 220/226 (97%), Gaps = 1/226 (0%)
Strand = Plus / Plus
Query: 1 cagtatcctgaaaagtattttgaaacatccaattgtctggctgcacatttgtagtcagag 60
||||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||
Sbjct: 201 cagtatcctgaaaagtattttgaaacatccaattgtctggctggagatttggagtcagag 260
Query: 61 tcctaactttggctttacgtatttgtgtgagtttgggtaggtccctttgtttatgtggat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcctaactttggctttacgtatttgtgtgagtttgggtaggtccctttgtttatgtggat 320
Query: 121 ttcagttgcttatatgcccacttaattgggtcatttctagactcctttggaaatctgaac 180
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 321 ttcagttgcttatatgcccacttaattggatcatttctagactcctttggaaatctgaac 380
Query: 181 ttcagccactggcctttctgtagcgggggggtggggggtgggggtt 226
|||||||||||||||||||||||| ||||| |||||||||||||||
Sbjct: 381 ttcagccactggcctttctgtagcaggggg-tggggggtgggggtt 425
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 230
Length of database: 629
Length adjustment: 9
Effective length of query: 221
Effective length of database: 620
Effective search space: 137020
Effective search space used: 137020
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
