Query= MSMg01no275_p15.b1 MSMg01no275_p15.b1 CHROMAT_FILE:
MSMg01no275_p15.b1 PHD_FILE: MSMg01no275_p15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:15:49 2005
(693 letters)
>mm_chr11_6384958_6386041
Length = 1084
Score = 1081 bits (559), Expect = 0.0
Identities = 605/625 (96%), Gaps = 11/625 (1%)
Strand = Plus / Minus
Query: 4 ggaattcaggggatctcgactaagccacatataatccaaggcagaggtaacaaaactggc 63
||||||||||||| || |||| |||||||||||||||||||||||| |||||||||||||
Sbjct: 614 ggaattcagggga-ctggactcagccacatataatccaaggcagagataacaaaactggc 556
Query: 64 attccactctgcgtacaatacaaggtagggcagtggggatggaaagagctgaaatggtcc 123
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 attccactctgcg-----tacaaggtagggcagtggggatggaaagagctgaaatggtcc 501
Query: 124 cacagctaatcagtgaaagatgaaggagaagctcccaagcttaaaggccagcatggctgg 183
|||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 cacagcaaatcagtgaaagctgaaggagaagctcccaagcttaaaggccagcatggctgg 441
Query: 184 agggcaggtgaggggggatgggttcagccgggcaaagttgacagtgggaggtgactacaa 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 440 agggcaggtgaggggggatgggttcagccgggcaaagttgacagtgggaggtgactataa 381
Query: 244 gatgcacacagtcagccttgccaagagtccaagtggtgggatcccagcttagcaggcaag 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 gatgcacacagtcagccttgccaagagtccaagtggtgggatcccagcttagcaggcaag 321
Query: 304 tgtgtgtgtgtgggggggggggcggcgggcagcaaggtgggcattgtgaagtgacatgca 363
|||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 320 tgtgtgtgtgtgtgggggggggcgg---gcagcaaggtgggcattgtgaagtgacatgca 264
Query: 364 tactgtaggctctcacaggcctgagcatggtggacattgggaagtgagtgactcatgtat 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 tactgtaggctctcacaggcctgagcatggtggacattgggaagtgagtgactcatgtat 204
Query: 424 tgaagggctctagtaggctggggcatgatgacaaatgtggtgcagacagctttacctttt 483
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 203 tgaagggctctagtaggctggggcatgatgacaaatgtggt--agacagctttacctttt 146
Query: 484 actcttctccccttgctaacctgctaaattccactagtaaagccagccctcaaggtctag 543
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 actcttctccccgtgctaacctgctaaattccactagtaaagccagccctcaaggtctag 86
Query: 544 ccctttatttggccactttctcttcctgaacctgaccaccaaggtccagctatcaacata 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 85 ccctttatttggccactttctcttcctgaacctgaccaccaaggtccagctatcaacata 26
Query: 604 ttgaagtgcagcaatcaaaaagccc 628
||||||||| |||||||||||||||
Sbjct: 25 ttgaagtgccgcaatcaaaaagccc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 693
Length of database: 1084
Length adjustment: 10
Effective length of query: 683
Effective length of database: 1074
Effective search space: 733542
Effective search space used: 733542
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no275_p15.g1 MSMg01no275_p15.g1 CHROMAT_FILE:
MSMg01no275_p15.g1 PHD_FILE: MSMg01no275_p15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:15:49 2005
(677 letters)
>mm_chr11_6229469_6230543
Length = 1075
Score = 1251 bits (647), Expect = 0.0
Identities = 669/677 (98%), Gaps = 3/677 (0%)
Strand = Plus / Plus
Query: 1 attccctttgcccgttcctttaggaccatcctttgtgctattagctggttctcgtggggg 60
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 202 attccctttgcccgttcctttagaaccatcctttgtgctattagctggttctcgtggggg 261
Query: 61 tggagggacagagtgttttgtttttcttacctgagaatctcttaattttcccttgttttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 tggagggacagagtgttttgtttttcttacctgagaatctcttaattttcccttgttttg 321
Query: 121 tttgtaggattctaagtagacagatatgatttctttcagctatggagcaacataccactt 180
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 322 tttgtaggattctaagtagacagatatgatttctttcagctatggaggaacataccactt 381
Query: 181 ttttctagcttttaggatttgtgatgagaaaaatctctaaatctctttttgttttgtttt 240
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 382 ttttctagcttttaggatttgtgatgagaaaa-tctctaaatctctttttgttttgtttt 440
Query: 241 gtattgtttttctctgtaagtggagactctcctttgttttaagttttctcaagttataca 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atattgtttttctctgtaagtggagactctcctttgttttaagttttctcaagttataca 500
Query: 301 ttttggcatcagtgccttttcctatggattcaatcaactttctgaatctgggagttaaac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttttggcatcagtgccttttcctatggattcaatcaactttctgaatctgggagttaaac 560
Query: 361 tcttctgatgtatttaaggaagttttcagctgttttctaagtactctttcggatactcgc 420
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 561 tcttctgatgtatttaaggaagttttcagctgttttctaagtactctttcagatactcgc 620
Query: 421 tttcagaaatttgccccacaagaatggaaaatctttaattacattagcacatatcctcag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tttcagaaatttgccccacaagaatggaaaatctttaattacattagcacatatcctcag 680
Query: 481 tgctttttaatgttagctttcatccatctgtttttccatcttcagattcactaagtctct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tgctttttaatgttagctttcatccatctgtttttccatcttcagattcactaagtctct 740
Query: 541 ttacctgtgacactaaacctgtctagtgaatttatttgtggggtttttatttcctttttt 600
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 741 ttacctgtgacactaaacctgtctagtgaatttatttgtggggttttaatttcctttttt 800
Query: 601 aaaaatgtatttactaatttttctgtgtgtgtgtacatgtgcaggcacacgtgctatagt 660
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 801 aaaaatgtatttactaatttttctgtgtgtgt--acatgtgcaggcacacgtgctatagt 858
Query: 661 gcatctgtggaggtcag 677
|||||||||||||||||
Sbjct: 859 gcatctgtggaggtcag 875
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 677
Length of database: 1075
Length adjustment: 10
Effective length of query: 667
Effective length of database: 1065
Effective search space: 710355
Effective search space used: 710355
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
