Query= MSMg01no277_c22.b1 MSMg01no277_c22.b1 CHROMAT_FILE:
MSMg01no277_c22.b1 PHD_FILE: MSMg01no277_c22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:17:16 2005
(239 letters)
>mm_chr11_62239092_62239730
Length = 639
Score = 431 bits (223), Expect = e-125
Identities = 232/237 (97%), Gaps = 4/237 (1%)
Strand = Plus / Minus
Query: 1 ctgcagaaacttttgagtttgatatataatcccaggtatttacttttgtggcctgagatc 60
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 ctgcagaaacttttgagcttgatatataatcccaggtatttacttttgtggcctgagatc 468
Query: 61 atgttatgttagcaaaaaaaaaaaaaaaaaaaaatcactgccaaggccagtgcctgctcc 120
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 atgttatgttagc----aaaaaaaaaaaaaaaaatcactgccaaggccagtgcctgctcc 412
Query: 121 ctctgtattctctggctgccctcgcatttcatcttctctcattttcatctggtttttctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 ctctgtattctctggctgccctcgcatttcatcttctctcattttcatctggtttttctg 352
Query: 181 tatcatgtctctaatttcattcttgtctgtgtagaaatccactttccccagcatgtg 237
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 tatcatgtctctaatttcattcttgtctgtgtagaaatccactttccccagcatgtg 295
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 239
Length of database: 639
Length adjustment: 9
Effective length of query: 230
Effective length of database: 630
Effective search space: 144900
Effective search space used: 144900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no277_c22.g1 MSMg01no277_c22.g1 CHROMAT_FILE:
MSMg01no277_c22.g1 PHD_FILE: MSMg01no277_c22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:17:16 2005
(240 letters)
>mm_chr11_62045635_62046273
Length = 639
Score = 453 bits (234), Expect = e-132
Identities = 237/238 (99%), Gaps = 1/238 (0%)
Strand = Plus / Plus
Query: 1 gtttaaagtgtcagctgtgagaggacatagggtaagagtgcaaatcttgtccccacatca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gtttaaagtgtcagctgtgagaggacatagggtaagagtgcaaatcttgtccccacatca 260
Query: 61 gaactagataacactatcgaatctgctcagtcatttgccagcacatttagatagtagtga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaactagataacactatcgaatctgctcagtcatttgccagcacatttagatagtagtga 320
Query: 121 gacaaggaggtctaaaagttactcttaaacaatgtaagaaatatataaccccccctccaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gacaaggaggtctaaaagttactcttaaacaatgtaagaaatatataaccccccctccaa 380
Query: 181 aaaaaatcatagaacagcccaaaactgcaacaccgacaagccagaaagaaacagaaaa 238
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaaaa-tcatagaacagcccaaaactgcaacaccgacaagccagaaagaaacagaaaa 437
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 240
Length of database: 639
Length adjustment: 9
Effective length of query: 231
Effective length of database: 630
Effective search space: 145530
Effective search space used: 145530
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
