Query= MSMg01no279_i20.b1 MSMg01no279_i20.b1 CHROMAT_FILE:
MSMg01no279_i20.b1 PHD_FILE: MSMg01no279_i20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:20:10 2005
(312 letters)
>mm_chr11_87535164_87535873
Length = 710
Score = 543 bits (281), Expect = e-159
Identities = 300/307 (97%), Gaps = 2/307 (0%)
Strand = Plus / Minus
Query: 5 gaattctataaagccaaaacaaaagtaagtattttagattttggtttggcctgtgagatt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 gaattctataaagccaaaacaaaagtaagtattttagattttggtttggcctgtgagatt 450
Query: 65 tttgagacgtttgcacagcttttttgagatgggaatcctaggaaaactccatttggctgg 124
|||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||
Sbjct: 449 tttgagacgtttgcacagctcttttgagctgggaatcctaggaaaactccatttggctgg 390
Query: 125 gtcaggtgatgggacctgattggcatgcttgggaaaggacaattcccttagcagagagag 184
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 389 gtcaggtgatgggacctgattggcatgcttgggaaaggacaattcccttagc--agagag 332
Query: 185 agagaagccaggtgtgatggctcaccctgactggcagtgtaactgggctgagaatcactt 244
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 331 agagaagccaggtgtgatggctcaccctgaccggcagtgtaactgggctgagaatcactt 272
Query: 245 aggggattaggaaagggtacctactgggggatgtatctgtgaagatgtttctggagagct 304
|||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 271 agggaattaggaaagggtacctactgggggatgtgtctgtgaagatgtttctggagagct 212
Query: 305 taattaa 311
|||||||
Sbjct: 211 taattaa 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 312
Length of database: 710
Length adjustment: 9
Effective length of query: 303
Effective length of database: 701
Effective search space: 212403
Effective search space used: 212403
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no279_i20.g1 MSMg01no279_i20.g1 CHROMAT_FILE:
MSMg01no279_i20.g1 PHD_FILE: MSMg01no279_i20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:20:10 2005
(287 letters)
>mm_chr11_87367939_87368625
Length = 687
Score = 545 bits (282), Expect = e-160
Identities = 282/282 (100%)
Strand = Plus / Plus
Query: 1 actagccgataacttgggggactgggaaaggtaatgcagggacttttgaattagggtcac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actagccgataacttgggggactgggaaaggtaatgcagggacttttgaattagggtcac 260
Query: 61 tggcactcactgctatggcagcaggagctgttggacattaggagaagaagccattagctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tggcactcactgctatggcagcaggagctgttggacattaggagaagaagccattagctg 320
Query: 121 tattttagaaaacattttgcatttttagaaaagtcatatctagagtggaacaaataagta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tattttagaaaacattttgcatttttagaaaagtcatatctagagtggaacaaataagta 380
Query: 181 aacagcacactgagctcgagagcaccccagtgtgagtgctgacgtctcaccccctccacc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aacagcacactgagctcgagagcaccccagtgtgagtgctgacgtctcaccccctccacc 440
Query: 241 tagaaagtaaccaggctttattttctctttcttcctttgtgt 282
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tagaaagtaaccaggctttattttctctttcttcctttgtgt 482
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 687
Length adjustment: 9
Effective length of query: 278
Effective length of database: 678
Effective search space: 188484
Effective search space used: 188484
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
