TCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCCAAGGATGACACCTATTGATTTGTTCTGCAACTCTAGTCTTGCAGA
CTGATATCAAAGTACACCCTCTCCTAACCAAAGCAACTCACCCCAGGCTA
GAAAGGAGATGTCTGGGGTGCCTTGAAATGGAAGCTCTCTTCATAAGAAC
GTTGATTGTGTGTTTGTTTGTTTGTTTGTTGTCTTTTTCTTCTTCTTTGA
ATAGCTGGGGGTAGTAGCTATGCACAGGCTCATTAGCACCAATAATAATT
GGACTGGGTACTAACTGGGGTCTGAATTATTCTGAGGCTCAGGGAACACT
GAGGAAGAGATGGTCTCTGGGATGTAAGAACAAGAGGAGGGCAGTGTGCC
ACCAAAGGATGTCTCCTGGATATGACACAGCTTTTGCAGTCACAAACTCA
CTGAAGCTGTGGTTACCTGCACAAAATATGGTGCATCAACCTTTCATTGA
AGGGGAGGGATAAATGAGGCTCCGTCCCTCCATGAAGAACCACTGTCAGC
TCATGGTTGCTAGCAAAAGAGTGGGCTTTCTATCAGTGATACCCCAACTG
AAAAGCGACCCACCTTCCAACCTCTCACCTATGCTCATCCAAGCAACCCT
AACTAAACTCAAACTCACACACACACACACACACACACACACATATTTAT
ACACACACATATATTATACACACTCACTCTTCACACATTTTTGTAGCTGG
AGTAGATTT

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAATGGCA
GAGAAGCACTTGAAAAAATGTTCACCATCCTTAATCATCAGGGAAATGCA
AATCAAAACAACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTAAGA
TCAAAAATTCAGGTGACAGCAGATGCTGGCGAGGATGTGGAGAAAGAGGA
ACACTCCTCCATTGTTGGTGGGAGTGCAGGCTTGTACAACCACTCTGGAA
ATCAGTCTGGCGGTTCCTCAGAAAACTGGACATAGTACTACCGGAGGATC
CAGCAATACCTCTCCTGGGCATATATCCAGAAGATGCCCCAACAGGTAAG
AAGGACACATGCTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCAG
AAGCTGGAAAGAACCTAGATGCCCCTCAACAGAGGAATGGATACAGAAAA
TGTGGTACATCTACACAATGGAGTACTACTCAGCTATTAAAAAGAATGAA
TTTATGAAATTCCTAGCCAAATGGATGGACCTGGAGGGCATCATCCTGAG
TGAGGTAACACATTCACAAAGAAACTCACACAATATGTATTCACTGATAA
GTGGATATTAGCCCCAAACCTAGGATACCCAAGATATAAGATATAATTTG
CTAAACACATGAAACTCAAGAAGAATGAAGACTGAAGTGTGGACACTATG
CCCCTCC

Query= MSMg01no279_k05.b1 MSMg01no279_k05.b1 CHROMAT_FILE:
MSMg01no279_k05.b1 PHD_FILE: MSMg01no279_k05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:20:17 2005
         (645 letters)



>mm_chr11_89551055_89552099
          Length = 1045

 Score = 1232 bits (637), Expect = 0.0
 Identities = 640/641 (99%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattccaaggatgacacctattgatttgttctgcaactctagtcttgcagactgatatc 64
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 gaattccaaggaagacacctattgatttgttctgcaactctagtcttgcagactgatatc 613

                                                                       
Query: 65  aaagtacaccctctcctaaccaaagcaactcaccccaggctagaaaggagatgtctgggg 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 aaagtacaccctctcctaaccaaagcaactcaccccaggctagaaaggagatgtctgggg 553

                                                                       
Query: 125 tgccttgaaatggaagctctcttcataagaacgttgattgtgtgtttgtttgtttgtttg 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 tgccttgaaatggaagctctcttcataagaacgttgattgtgtgtttgtttgtttgtttg 493

                                                                       
Query: 185 ttgtctttttcttcttctttgaatagctgggggtagtagctatgcacaggctcattagca 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 ttgtctttttcttcttctttgaatagctgggggtagtagctatgcacaggctcattagca 433

                                                                       
Query: 245 ccaataataattggactgggtactaactggggtctgaattattctgaggctcagggaaca 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 ccaataataattggactgggtactaactggggtctgaattattctgaggctcagggaaca 373

                                                                       
Query: 305 ctgaggaagagatggtctctgggatgtaagaacaagaggagggcagtgtgccaccaaagg 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 ctgaggaagagatggtctctgggatgtaagaacaagaggagggcagtgtgccaccaaagg 313

                                                                       
Query: 365 atgtctcctggatatgacacagcttttgcagtcacaaactcactgaagctgtggttacct 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 atgtctcctggatatgacacagcttttgcagtcacaaactcactgaagctgtggttacct 253

                                                                       
Query: 425 gcacaaaatatggtgcatcaacctttcattgaaggggagggataaatgaggctccgtccc 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 gcacaaaatatggtgcatcaacctttcattgaaggggagggataaatgaggctccgtccc 193

                                                                       
Query: 485 tccatgaagaaccactgtcagctcatggttgctagcaaaagagtgggctttctatcagtg 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 tccatgaagaaccactgtcagctcatggttgctagcaaaagagtgggctttctatcagtg 133

                                                                       
Query: 545 ataccccaactgaaaagcgacccaccttccaacctctcacctatgctcatccaagcaacc 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 ataccccaactgaaaagcgacccaccttccaacctctcacctatgctcatccaagcaacc 73

                                                    
Query: 605 ctaactaaactcaaactcacacacacacacacacacacaca 645
           |||||||||||||||||||||||||||||||||||||||||
Sbjct: 72  ctaactaaactcaaactcacacacacacacacacacacaca 32


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 45
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 645
Length of database: 1045
Length adjustment: 10
Effective length of query: 635
Effective length of database: 1035
Effective search space:   657225
Effective search space used:   657225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)